Gene Gbem_1202 details

Gene Information

• Locus tag: Gbem_1202
• ID: 6781182
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 1396236
• End bp: 1397306
• Gene Length: 1071 bp
• Protein Length: 356 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 642767189
• Product: diguanylate cyclase
• Protein accession: YP_002138017
• Protein GI: 197117590
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2203] FOG: GAF domain; [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain
• TIGRFAM ID: [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0240122
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGAGT GTAGTTGCGG TACCCAAAAA GAATTGCTCG AATCGCAGGT TAAGGCGCTG 
AAGGACCTGA TAGAGGTCGC CAAGGCGGTC GTCTCGACGC TCGATCTGGA TACGGTGCTG 
CAGGCTATCC TCAACAGTGC CATGGGATTT GCCGAGACCC CCGCCGGAAG CGTCGCCCTT 
TATTACGACG CCAAGCGGGA GCTGAGCCTG CATGCCCACT CGGGGCTGAC GGCGGACTTC 
GTCAAGAAGG AGCGTTGGGA GGTGGCCCCG GGCGGGCTTA CCGAACAAGT GCTCTCTGCG 
GGGGAGATCT TCTTGATCGA GGACACGGAG AAGACTCCGT TCTTCAAGAA CCCGATAGCG 
CTCAACGAGG GTATCCGCTC TCTGGTCTGC GTGCCGCTCA TCTTCCAGTC GCGCATCGTC 
GGGATACTCT ACCTTGACGA TTTTAAGCCC AGGGAGTTCG ACCGGGAGAA GATGAACATG 
CTCTCGATCC TCGCCTCCTT CGCCGCCATG GCGATACACA ACGCGACGCT GCACAAGCGG 
ACCAAGCTAC TGGCGATCAC CGACTCGCTC ACCGGGCTGC ACAACCACCG CTACTTCAAG 
CAATACTTCA GGCAGGAGAT GGGGCGTGCC AAGCGCTACC ACAAGCCCTT CTCCATCATC 
ATGATGGACG TGGACGACTT CAAGTCCTAC AACGACAGCT ACGGCCACGC AACCGGCGAC 
AGGTTGCTGG CCCTCATGGG CGAGATCATC CTGGAGACCA TCCGCGGCGT GGACGTCGCC 
TTCCGCTACG GCGGGGAAGA ATTCATCGTG CTGCTCCCCG AGACCACGCT TGACAAGGCT 
ATCCTCGCCG CCGAGCGTCT GCGCGAAAGC GTGCAGGCCG GGACTGCGAG CCGGCCCGTG 
GACGGGTCAG GCCGCGGCGT GACCGTCAGC ATCGGCGTGG CGAGCTATCC GGACAATGCC 
GACAAGATGG ACGAACTCTT CAACATCGTC GATTCGCTCC TTTACCTTGC CAAGCGCTGC 
GGCAAGAACA AGGTCTATCA CCAGGAAAGC CTACAGATCC CCGCGCCATG A 

 

Protein sequence

MSECSCGTQK ELLESQVKAL KDLIEVAKAV VSTLDLDTVL QAILNSAMGF AETPAGSVAL 
YYDAKRELSL HAHSGLTADF VKKERWEVAP GGLTEQVLSA GEIFLIEDTE KTPFFKNPIA 
LNEGIRSLVC VPLIFQSRIV GILYLDDFKP REFDREKMNM LSILASFAAM AIHNATLHKR 
TKLLAITDSL TGLHNHRYFK QYFRQEMGRA KRYHKPFSII MMDVDDFKSY NDSYGHATGD 
RLLALMGEII LETIRGVDVA FRYGGEEFIV LLPETTLDKA ILAAERLRES VQAGTASRPV 
DGSGRGVTVS IGVASYPDNA DKMDELFNIV DSLLYLAKRC GKNKVYHQES LQIPAP