| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1201 |
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| Symbol | |
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| ID | 6781181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 1393765 |
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| End bp | 1395999 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642767188 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_002138016 |
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| Protein GI | 197117589 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0301379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAA CAGTCGAGAA GGGAGTAATA CCGGGCCTGA CCAAGAATGC ATTGACCGTA
CTAGAGAAGC GCTACCTGAA GAGAGACCAG ACCGGCAAGA CCCTTGAGAC TGCCTCAGAC
ATGTTCCGCC GCGTGGCGAC CGCCATCGCG CAGGCCGACG CCGTTTTCGA CAAGAAAGCG
GACATCGGCG CACTCTCCGA CAAGTTCTAC AACATGATGA CCAACTTCGA GTTCCTCCCC
AACTCCCCGA CCCTGATGAA CGCCGGACGC GAGCTGGGTC AGCTCTCCGC CTGCTTCGTG
CTTCCGGTGG GCGACAGCAT GGAGGAAATC TTCGAATCGG TCAAGTACAC CGCCCTCATC
CACAAATCCG GCGGCGGCAC CGGCTTCTCC TTTTCCCGCC TGCGCCCGGC CAACGACGTG
GTCATGTCCA CCACCGGCAT CTCCAGCGGC CCCCTCTCCT TCATGAGGGT TTTCGACGTC
GCCACCGAGA CCATCAAGCA GGGGGGCACC CGTCGCGGCG CGAACATGGC GATACTGCGC
GTCGACCATC CGGACATCAT GGACTTCATC ATGTGCAAGG CGGATCAGCG CCAGCTGAAC
AACTTCAACA TCTCCGTCGG CATCACCGAG GCGTTCATGA AGGCCGTCGA CGCGGACGAG
GAGTACACCC TTTACAACCC GCGCGACAAA CAGCCGGCCG GGAAGCAGAA CGCCCGCAAG
GTATTCAACC GCATCGTCAA GCAGGCCTGG GAAAACGGCG AGCCTGGGAT CATCTTCCTG
GACCGCCTGA ACAAGGACAA CCCGACCCCG CACATAGGCG AGATCGAATC CACCAACCCC
TGCGGCGAGC AGCCGCTGCT CCCCTACGAG TCCTGCAACC TGGGCTCCAT CAACCTGGGC
AAGATGGTCA TCCACGGCAA GGTCGACTGG GACAAGCTGA AAGAGGTAGT GCGCACCTCC
GTCCACTTCC TTGACAACGT CATCGAGGTG AACAACTACC CGCTGCAGCA GATCGACGAG
ATGACCCGCT CCAACCGTAA GATCGGCCTG GGGGTCATGG GATGGGCGGA CATGCTGATC
ATGCTCGGCA TCCCCTACGG CTCCGAGGAG TCGGTGGAAC TGGGCGAGAA GGTGATGCAG
TTCATCAACG ACGAAGGGCA CGCGGCGTCC CGCCAGCTTG CCAAGACCCG CGGCGCCTTC
CCCAACTTCA AGGGCTCCGT CTACGACAAG CTCGGCGCAG AGCCGATCCG GAACGCGACC
GTCACCACCA TCGCTCCGAC CGGCACCATT TCCATCATCG CCAACGCCTC CTCCGGCGTC
GAGCCGCTCT TCGCGGTCTC TTACGTGCGC CAGGTCATGG ACAAGAACAT CCTGGTCGAA
GTGAACCCGC TTTTCGAGAA GATCGCCAAG ACCGACGGTT TCTATACCGA CGAACTGATG
CAGCGGATCG CCGAGCACGG CACCGTTCAG GACATAAGCG CCATCCCCGA GGCCGTCCGC
GAGGTATTCG TCACCGCGCA CGACATCACC CCGGAAGAGC ACATCACCAT GCAGGCTGCC
TTCCAGCGCC ACACCGACAA CGCCGTCTCC AAGACCGTGA ACTTCCCGTG CGAAGCCACC
ATCGAGGACG TCGAGAAGGT CTACCGCCTG GCCTACGAGA GCAACTGCAA GGGGGTCACC
ATCTACCGTG ACGGTTCCCG CGACGAGCAG GTTCTCTCCG TCGGCAAGAA AGAAGAAGTA
AAGGCCGCAG CACCGGTGCA TGTCGAAGAC AAGCGCACCG GCAAACGCGA GCGTCCCAAG
GCGCTGAAGG GTTGGACCTA CCAGATGCAG ACCGGCTGCG GCCCGCTCTA CATCACCATC
AACGAAGACA ACACCGGCCT CTTCGAAGTC TTCACCACCA TGGGCAAAGC CGGCGGTTGC
GCCGCCTCCC AGTGCGAGGC CATCGGCCGC ATGGTGTCTC TTGCCTGGAG AAGCGGCATT
CAGGGGCGTC AGGTAGTGAA GCAGCTTCTC GGCATCTCCT GCCACGCGCC GAGCGGATTC
GGCGACAACA AAGTACTGTC CTGCGCCGAT GCGGTCGCCA AGGCGATCCA GTCGCACCTC
TCCCTGACCG GTGCAGCCGA CGTCATCGAA GCCCCCGCCT TCGACAGAGG CGCCTGCCCC
GAGTGCGGCG GCGTAGTAGA GCACGAAGGC GGCTGCGCCG TCTGCCGCGT CTGCGGCTAC
TCCGAGTGCG CGTAA
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| Protein sequence | MKKTVEKGVI PGLTKNALTV LEKRYLKRDQ TGKTLETASD MFRRVATAIA QADAVFDKKA
DIGALSDKFY NMMTNFEFLP NSPTLMNAGR ELGQLSACFV LPVGDSMEEI FESVKYTALI
HKSGGGTGFS FSRLRPANDV VMSTTGISSG PLSFMRVFDV ATETIKQGGT RRGANMAILR
VDHPDIMDFI MCKADQRQLN NFNISVGITE AFMKAVDADE EYTLYNPRDK QPAGKQNARK
VFNRIVKQAW ENGEPGIIFL DRLNKDNPTP HIGEIESTNP CGEQPLLPYE SCNLGSINLG
KMVIHGKVDW DKLKEVVRTS VHFLDNVIEV NNYPLQQIDE MTRSNRKIGL GVMGWADMLI
MLGIPYGSEE SVELGEKVMQ FINDEGHAAS RQLAKTRGAF PNFKGSVYDK LGAEPIRNAT
VTTIAPTGTI SIIANASSGV EPLFAVSYVR QVMDKNILVE VNPLFEKIAK TDGFYTDELM
QRIAEHGTVQ DISAIPEAVR EVFVTAHDIT PEEHITMQAA FQRHTDNAVS KTVNFPCEAT
IEDVEKVYRL AYESNCKGVT IYRDGSRDEQ VLSVGKKEEV KAAAPVHVED KRTGKRERPK
ALKGWTYQMQ TGCGPLYITI NEDNTGLFEV FTTMGKAGGC AASQCEAIGR MVSLAWRSGI
QGRQVVKQLL GISCHAPSGF GDNKVLSCAD AVAKAIQSHL SLTGAADVIE APAFDRGACP
ECGGVVEHEG GCAVCRVCGY SECA
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