Gene Gbem_1172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1172 
Symbol 
ID6781152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp1364086 
End bp1364793 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content65% 
IMG OID642767159 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002137987 
Protein GI197117560 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAGA GCCAAGAGGC GACCGGGCAG CGCATACTCG TCATCGACGA CGAGGCGGCC 
ATTCGCCGCT TCCTGCATTC CGCGCTGTCC TCGGATGAAT TCATCCTCCA CGAGGCCGAT
TCCGGGCACG GCGGGCTATC AGCCGCCGCG GCCTTGAGGC CCGACCTGAT CCTATTGGAC
CTGGGGCTTC CCGACCTGGA GGGTATCGAG GTGATCCGCC GTATCCGCGA GTGGTCCCAG
GTCCCCATCA TCGTCCTCTC GGTGCGCGAG CGTGAGGACG ACAAGGTGGC GGCTCTCGAC
GCCGGGGCCG ACGACTACCT CACCAAGCCC TTCGGGGTGG GGGAACTGCT GGCCCGCATG
AGGGCCTCCC TGCGCCGTTC CGCGGTGCAG CTCTCCGAGC CGGTCTTCTC AAGCGGCGAC
CTTACGGTGG ACCTGAACCT GCGCCGGGTG ACGGTGGAGG GAGCCGAGGT CCAGTTGACG
CCCACCGAGT ACGACCTCTT GCGCCTGCTC ATCACCCACG CGGACAAGGT CATAACCCAC
AGCCAGATCC TGAAGCAGAT CTGGGGGGTG GCGTACCAGG ATCAGCCCCA GGTGCTCAGG
GTTACCATCA GCAACCTGAG GAAGAAGGTC GAGCGGGACC CCTCGCGCCC CAGGCACATC
ACCACCGAAC CCGGGGTCGG GTATCGGTTC AAGCAGGTGC AACCATGA
 
Protein sequence
MKESQEATGQ RILVIDDEAA IRRFLHSALS SDEFILHEAD SGHGGLSAAA ALRPDLILLD 
LGLPDLEGIE VIRRIREWSQ VPIIVLSVRE REDDKVAALD AGADDYLTKP FGVGELLARM
RASLRRSAVQ LSEPVFSSGD LTVDLNLRRV TVEGAEVQLT PTEYDLLRLL ITHADKVITH
SQILKQIWGV AYQDQPQVLR VTISNLRKKV ERDPSRPRHI TTEPGVGYRF KQVQP