| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1161 |
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| Symbol | |
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| ID | 6781141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1351441 |
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| End bp | 1352268 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642767148 |
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| Product | cytochrome c assembly protein |
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| Protein accession | YP_002137976 |
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| Protein GI | 197117549 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR03144] cytochrome c-type biogenesis protein CcsB |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.14813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCTG AATTAATCTG TTTTTGGCTC GCTGTAGCTC TGTATGGGGT AAGTGCATTC
AGTTACATTT TCGGCCTGAT CGGAAAGTTC GACAAGCTCT TCCTGGTCGG GTTGCTGAGC
GCCCTGGCCG GGTTCGTCCC GCACACCGCG AGCATCGGTC TGCGCTGGAC GGCAAGCGGG
GTCGAACCCT TCATCACCAT CTCCGAGTCG ATCACCTTCG GTGTCTTCAT GGCGGTGCTG
CTCTTTTTGA TTTTTCAGCT GACCGTGAAG AAGGTGGCGC CGCTCGGGGT CCTGGTGATG
CCGATCTCCT TCGTGCTCAT GGGCTGGGCG GGCACTCTGA TGAAGGAGGT TGCGACGTCG
CTCAACCCGG CGCTGCAAAG CGCCTGGCTC TGGGTGCACA TCGTCGGCGC CACCTCCGGC
TTCGCCTCGG TACTGATCGC CGCTGGGCTC GGGCTCATCT ACCTGCTGAA GCAGAAGAAC
TCGGGCGGCA TCTATGATCG GCTCCCCGAA CTGGGGGTGC TGGATACCCA GAGCTACCGC
TTCGTGGCCG GCGGGTTCAT CATGTACGGC CTCATGATCA TCTCCGGGGC CTACTGGTCC
AACACGGTGA AGGGGAACTA CTGGGCCTGG GACCCGGTCG AGGTCTGGTC CCTGATCTCC
TGGCTCATCT ACGGCATCTA CCTGCACCTG AGAGTCACCT TCGGCTGGCG CGGTTCCAGG
CTCGCCTGGT ATTCACTGGC GGCACTGGTA GTGATGATCG TGAGCTACTG GGGCATCCCC
TTTTCCATGG AAACCTTCCA CTCCGGTTTC CGGATCGACC ACACGTAA
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| Protein sequence | MKPELICFWL AVALYGVSAF SYIFGLIGKF DKLFLVGLLS ALAGFVPHTA SIGLRWTASG
VEPFITISES ITFGVFMAVL LFLIFQLTVK KVAPLGVLVM PISFVLMGWA GTLMKEVATS
LNPALQSAWL WVHIVGATSG FASVLIAAGL GLIYLLKQKN SGGIYDRLPE LGVLDTQSYR
FVAGGFIMYG LMIISGAYWS NTVKGNYWAW DPVEVWSLIS WLIYGIYLHL RVTFGWRGSR
LAWYSLAALV VMIVSYWGIP FSMETFHSGF RIDHT
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