| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1153 |
|---|
| Symbol | |
|---|
| ID | 6781133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 1332823 |
|---|
| End bp | 1335699 |
|---|
| Gene Length | 2877 bp |
|---|
| Protein Length | 958 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642767140 |
|---|
| Product | cytochrome C family protein |
|---|
| Protein accession | YP_002137968 |
|---|
| Protein GI | 197117541 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01904] Geobacter sulfurreducens CxxxxCH...CXXCH domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTACCTA AGTACGGAGG ACGATGTTTG TTCGGGTTGG CACTTCTGGT GCTGACACTG
ATGACGCTTG GTGCCGGACA GGCACAAGCT GCTTCGCAGT ACAGCTATGA CTGTACCTTC
TGTCACCAAA TGCCGCCGCT GGATTCCGCC AACGCGAAGA AGGACCCCAA CACGGGCGCC
ATTCCCGGCA ACCACCAGGG TCACGCTTCG GCAGCGGTCA ATTCCTGCGC CAAGTGCCAC
GGCGACGTGA GCGGCTACGC CATGGGCCAC AGGAACAAGA CCATCGAGCT TGCCGACGGC
ATCGGCTACT CGCGGAAGAT CGCAGCCGGG TTCGTGAACC AGACCTCGGT ACCGCCGACC
CCGATGGGTT CCTGCTCCAC CGCGGCCTGC CACAGTAACG GCAAGGGCAC CCTTAAGGCC
ACCCCGGCCT GGGGCGCTGC ACCGTTCCAG GCTCCCGGCG ACTGCTCCCA GTGCCACGAC
GTAGCTCCGG CTACCGGCAA CCACCCGACA CTCAATAGCA AGCACGCCTC CTACTTCGGC
ACCGGTACCG GCTCCTGCGT TAAGTGCCAT ACCGACCACA GCGCTCAGGC AAAGCCCTTC
AGCCACGCAA CCTCCGCCGG CCGTGCCATC GAAGTGGTGC TCCCCGACGG CGGCTCCTTC
GCCGGCAACC AGTGCGCCAA CCTCTACTGC CACAGCAACG GCCAGGGTAG CTTCACCCCG
CCGACCTGGG GCGCTTCTCT TAGCTGCGCC GGCTGCCACG GCGACGCGAC CAGCAACACC
CTCTCCGGCA AGCACGCCAA ACACGTGAAC AACGCCGGCT TCCTCGGCAC CAACTACGGC
TGCGTGGAGT GCCACTCCGC CACCGTGACC GACAACAACA CTATCGGCAA CTTCAACAAC
CACGTCAACA AGAACAAAGA CGTCGCGGGC GCCCACGTAG GGACCCCGGT TGCCGGGACC
TGCTCCACCT CCTACTGCCA CACCGACGGC AAGGGAGTCC AGAAGACGGT TACCTGGACC
CAGACCCAGG CGCTGGACTG CAAAAGCTGC CACGGCTCCG ACACGGCGCC TGGTGCTGTC
GCCTCCATCG CCGGCGAGCC TAACTACAAG AACGACGGTA TGGACCAGCC GCGCGCCAAC
AGCCACGCAA ACCACGTATT CAGCGCTGCC AGCTGCCAGA ACTGCCACGT CAACACCACC
ACCGACGGCC TGACCATCAA GGCCGGCGCT CCGCACACCG ACGGCACCCG CAACGTAGCA
GCCGGCAACG GCAAGAGCTT CACCATCGCA GGGAACAGCT GCTCCGCAGT ATCCTGCCAC
GACGGCGGCG GCAAGATCGC AGGCGTCGGC GCTGCCAAAT GGGGCCAGTC GCTTGGCTGC
AACGGCTGCC ACGGCGACGC CGCAACCCTT ACCACCAACG CCCACGCGGC TCACGTTTCC
ACCAAGGGCT ATGCCTGCGA CACCTGCCAC GCGCAGACCG TCACCGGCAG CACCACCTTT
GCCGACAAGA CCCTGCACGG CGACGCCATC GTCGAGGTTG CCGGCGTCAA GGTAACCAGC
TTCGCCACCG ACACCAAGAA CTGCGCCACT TCCTGCCACC TTTCCGGCAC CCCGAAGTGG
AACGACAAGA ACTCCGGCGC TTGCGGTACC TGCCATAAAG CGCTTTCCAC CACCGCGAAC
GGCCTGGTGA GCAGCAACGC CCACTCCGCC CACTTCACCG CAACCTACGG CCCGGGCTTC
GACGGCGCCG CTGCCACCTC CTGCTCCGGC TGCCATACCC CGAACACCGC GGCCAGCCAC
GCAGACGGCA CGCTTAACCT CGCCATCGGC TACAACAAGA TCGGCACCTG CTCCTCCTGC
CACAAGCAGT CGACCAACTG GACCACCGGG CGCGTTTCCT GCGAAAGCTG CCACAGCACC
GCAGGGGGCC AGCTCTCCGT CATCGGCGCC CTCACCGCTC CGGACAAGAC CCTGGCAGCG
ACCGCGGGCC ACGGCAAGAC CGGAATCAAC CAGTCCTGCT CCGCTTGCCA CGACGCCAAC
TCCGCACACA TCAACGGCAT AGCCGGCGAC CAGAAGCGTC TCTTGGGCGC CTTGACCGGC
GCGGACAACC AGGAATGTAA CTACTGCCAC ACCGACGCAG GCAAGGTGGC CGGCGCCGCT
CTGAACGTGA AGGTGCACCG TCCCACCGGC GCACTCGGCG CCAAGTGCTC CGACTGCCAC
AACGCGCACG GTACCGCAAA CAGCATGATG ATTAACGGCA CGATCAACGG GACCGCGGTG
AGCTTCACCA CCGTCAACAC CTTCGCCAAC GGAGCACGCA CCGGCGTCTG CCAGGTCTGC
CACACCACGA CCCAGTACTT CACCAAGGCC GGGCAGCCGG AGGCAACCCA CGTGGATTCC
ACCACGAACT GCCTCGAGTG CCACCAGCAC AACCCGGCAA CCGGCCTCGC CTTCGTTCCC
AACGGCGGAT GCGACGCCTG CCATGGCTAC CCGCCGGCTC CGAGAAAAAC CATCTCCGCA
GTCACCTTCG GTGTCCAGGG CAACTGGTCT TCCGCCCGCT TCGAAGACTA CTCCGGCGGC
GGCGGCGCCC ACGCGGTTGC AGCTCACATC AAGAAAGACG CCAAGCCTTC CGAGGGTTGG
GCAAACTGCC TCCCCTGCCA CAACGGCGGC AACGATGCTC ACTCAAGGGC GCTGCCGATC
AGGAACCACG TGGACAACGT CACCGTCAAG ATCGATCCGC AGTACCGCTT CAGCGACGAT
CCGTTCCTGG GCTACACTTC CGCCCAGCTG GTCAACGGCG GGGTCAACAA GTCCGGCAGC
TGCTTCAACG TGAGCTGCCA CTTCAAGAAG ACCAAGCCGT GGAGTATCGA AAGGTAG
|
|---|
| Protein sequence | MLPKYGGRCL FGLALLVLTL MTLGAGQAQA ASQYSYDCTF CHQMPPLDSA NAKKDPNTGA
IPGNHQGHAS AAVNSCAKCH GDVSGYAMGH RNKTIELADG IGYSRKIAAG FVNQTSVPPT
PMGSCSTAAC HSNGKGTLKA TPAWGAAPFQ APGDCSQCHD VAPATGNHPT LNSKHASYFG
TGTGSCVKCH TDHSAQAKPF SHATSAGRAI EVVLPDGGSF AGNQCANLYC HSNGQGSFTP
PTWGASLSCA GCHGDATSNT LSGKHAKHVN NAGFLGTNYG CVECHSATVT DNNTIGNFNN
HVNKNKDVAG AHVGTPVAGT CSTSYCHTDG KGVQKTVTWT QTQALDCKSC HGSDTAPGAV
ASIAGEPNYK NDGMDQPRAN SHANHVFSAA SCQNCHVNTT TDGLTIKAGA PHTDGTRNVA
AGNGKSFTIA GNSCSAVSCH DGGGKIAGVG AAKWGQSLGC NGCHGDAATL TTNAHAAHVS
TKGYACDTCH AQTVTGSTTF ADKTLHGDAI VEVAGVKVTS FATDTKNCAT SCHLSGTPKW
NDKNSGACGT CHKALSTTAN GLVSSNAHSA HFTATYGPGF DGAAATSCSG CHTPNTAASH
ADGTLNLAIG YNKIGTCSSC HKQSTNWTTG RVSCESCHST AGGQLSVIGA LTAPDKTLAA
TAGHGKTGIN QSCSACHDAN SAHINGIAGD QKRLLGALTG ADNQECNYCH TDAGKVAGAA
LNVKVHRPTG ALGAKCSDCH NAHGTANSMM INGTINGTAV SFTTVNTFAN GARTGVCQVC
HTTTQYFTKA GQPEATHVDS TTNCLECHQH NPATGLAFVP NGGCDACHGY PPAPRKTISA
VTFGVQGNWS SARFEDYSGG GGAHAVAAHI KKDAKPSEGW ANCLPCHNGG NDAHSRALPI
RNHVDNVTVK IDPQYRFSDD PFLGYTSAQL VNGGVNKSGS CFNVSCHFKK TKPWSIER
|
|---|
| |