Gene Gbem_1132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1132 
Symbol 
ID6781110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp1308919 
End bp1310271 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content54% 
IMG OID642767118 
ProductOmpA/MotB domain protein 
Protein accessionYP_002137948 
Protein GI197117521 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000365045 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCTA TAACGCGCGT GTTCATTCCA CCGGCACTGA TTGCTTTGCT GCTGATTCTA 
CACACGCAAT GCCTAGCGGC AGACAAATAC GACAGTTTCA CTACAACCCC TGTAGTAGGT
ATCTTCAGTC CAGGCAGCTT CAGTTCCCTC AAGCCTGGTT TAATGGCAGG GGTTAAGATT
GACAAACAGC TGACAGACAC TTTTGGGATT GAGGGAGACA TCAGCATGGT TGGTGCCGAC
GCAAAATCGT CAGGCAGCAC AGCCCTATAC CTAGTCACCT TACAGACTAT TTATCCTTTT
CTCGAACGCC CCAATTTAAC CCCATTCTTG ACGTTCGGTG CTGGCGGACT CATTGCTGAC
AAAGGGTCAT CGAGCCCTTT AGTAAACTTC GGTCTCGGAG CCAAGTACTT CATAAAAAAG
GATGTTGCCT TCAGGTTTGA TTTCCGGGAT GTCGCCGCAA GCAGCCAGGG AAACAGTTTC
GAATTAACTG CGGGGGTAAG TTTCGTCTTC GGCGGAGAAA AGAAGCAGCC CCGCCACAGG
GCGCGCCCAC AGATTGCCGC AGCGACACCT ATGACGAATC CGGCGGCCAC CGAGGCATCA
ACTAGCCTTT CGACACAAAC GGCTAAAGAC CAGCCTGTTA TAACGCATAG GGAAACCCCT
AAGCCAGTTC CCGCATCCCC CGCGCCTGCA ACTGTTGCAA CGACGCCGCA GAGTCTTGCC
GTTCCAGTGA TCGCCACGCC CGGCATTGCC TCCTCTGCAT CAAGCGTGCA GCCTCCCCCC
GTGGCTGCAA CTGTTGCAAC GACGCCGCAG AGCCTTGCCG TTCCAGTGAT CGTCACGCCC
GGCATTGCCT CCTCTGCATC AAGCGTGCAG CCTCCCCCCG TGGCTGCAGA AATTGCAAAA
ACGGCACCGG CGCCACGAGA GAACGACAGC ACCGAAGCAA CAGACCAGGC AAAACAAATA
GAACTGGAAG CTGAAAAAAA ACCAGCGTCA ACACCTTCCG TGCCAGTTGC CGCCCCGTTA
CTCAAAGCCA CCTTCGAGTT CGACTGCAAC AGCTACAAAA TCAGGCCGAG CTTCATCGAT
GTGGGGCGAA AAATCGGCCT GTTCATGAAG CGTAACCCAC AGATCATTGC ACAGATCCAC
GGACACGCCG ATATCACCGG CAGCGATGAC CACAACCTCG CGCTTTCAGA GAAACGCGCA
GTGCGAACAA AGCAGTACCT GATGAAGATG TACAATCTTT CTGCCGATCG GTTCGAAATC
CGCACCATGG GCAGTTCCGA ACCGATCGCA GATAACACGA CAGAGGTCGG TCGCAAAAAA
AACCGCCGGG CCCTCGTCAT CATTTTAAAG TGA
 
Protein sequence
MNAITRVFIP PALIALLLIL HTQCLAADKY DSFTTTPVVG IFSPGSFSSL KPGLMAGVKI 
DKQLTDTFGI EGDISMVGAD AKSSGSTALY LVTLQTIYPF LERPNLTPFL TFGAGGLIAD
KGSSSPLVNF GLGAKYFIKK DVAFRFDFRD VAASSQGNSF ELTAGVSFVF GGEKKQPRHR
ARPQIAAATP MTNPAATEAS TSLSTQTAKD QPVITHRETP KPVPASPAPA TVATTPQSLA
VPVIATPGIA SSASSVQPPP VAATVATTPQ SLAVPVIVTP GIASSASSVQ PPPVAAEIAK
TAPAPRENDS TEATDQAKQI ELEAEKKPAS TPSVPVAAPL LKATFEFDCN SYKIRPSFID
VGRKIGLFMK RNPQIIAQIH GHADITGSDD HNLALSEKRA VRTKQYLMKM YNLSADRFEI
RTMGSSEPIA DNTTEVGRKK NRRALVIILK