Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1132 |
Symbol | |
ID | 6781110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 1308919 |
End bp | 1310271 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642767118 |
Product | OmpA/MotB domain protein |
Protein accession | YP_002137948 |
Protein GI | 197117521 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000365045 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGCTA TAACGCGCGT GTTCATTCCA CCGGCACTGA TTGCTTTGCT GCTGATTCTA CACACGCAAT GCCTAGCGGC AGACAAATAC GACAGTTTCA CTACAACCCC TGTAGTAGGT ATCTTCAGTC CAGGCAGCTT CAGTTCCCTC AAGCCTGGTT TAATGGCAGG GGTTAAGATT GACAAACAGC TGACAGACAC TTTTGGGATT GAGGGAGACA TCAGCATGGT TGGTGCCGAC GCAAAATCGT CAGGCAGCAC AGCCCTATAC CTAGTCACCT TACAGACTAT TTATCCTTTT CTCGAACGCC CCAATTTAAC CCCATTCTTG ACGTTCGGTG CTGGCGGACT CATTGCTGAC AAAGGGTCAT CGAGCCCTTT AGTAAACTTC GGTCTCGGAG CCAAGTACTT CATAAAAAAG GATGTTGCCT TCAGGTTTGA TTTCCGGGAT GTCGCCGCAA GCAGCCAGGG AAACAGTTTC GAATTAACTG CGGGGGTAAG TTTCGTCTTC GGCGGAGAAA AGAAGCAGCC CCGCCACAGG GCGCGCCCAC AGATTGCCGC AGCGACACCT ATGACGAATC CGGCGGCCAC CGAGGCATCA ACTAGCCTTT CGACACAAAC GGCTAAAGAC CAGCCTGTTA TAACGCATAG GGAAACCCCT AAGCCAGTTC CCGCATCCCC CGCGCCTGCA ACTGTTGCAA CGACGCCGCA GAGTCTTGCC GTTCCAGTGA TCGCCACGCC CGGCATTGCC TCCTCTGCAT CAAGCGTGCA GCCTCCCCCC GTGGCTGCAA CTGTTGCAAC GACGCCGCAG AGCCTTGCCG TTCCAGTGAT CGTCACGCCC GGCATTGCCT CCTCTGCATC AAGCGTGCAG CCTCCCCCCG TGGCTGCAGA AATTGCAAAA ACGGCACCGG CGCCACGAGA GAACGACAGC ACCGAAGCAA CAGACCAGGC AAAACAAATA GAACTGGAAG CTGAAAAAAA ACCAGCGTCA ACACCTTCCG TGCCAGTTGC CGCCCCGTTA CTCAAAGCCA CCTTCGAGTT CGACTGCAAC AGCTACAAAA TCAGGCCGAG CTTCATCGAT GTGGGGCGAA AAATCGGCCT GTTCATGAAG CGTAACCCAC AGATCATTGC ACAGATCCAC GGACACGCCG ATATCACCGG CAGCGATGAC CACAACCTCG CGCTTTCAGA GAAACGCGCA GTGCGAACAA AGCAGTACCT GATGAAGATG TACAATCTTT CTGCCGATCG GTTCGAAATC CGCACCATGG GCAGTTCCGA ACCGATCGCA GATAACACGA CAGAGGTCGG TCGCAAAAAA AACCGCCGGG CCCTCGTCAT CATTTTAAAG TGA
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Protein sequence | MNAITRVFIP PALIALLLIL HTQCLAADKY DSFTTTPVVG IFSPGSFSSL KPGLMAGVKI DKQLTDTFGI EGDISMVGAD AKSSGSTALY LVTLQTIYPF LERPNLTPFL TFGAGGLIAD KGSSSPLVNF GLGAKYFIKK DVAFRFDFRD VAASSQGNSF ELTAGVSFVF GGEKKQPRHR ARPQIAAATP MTNPAATEAS TSLSTQTAKD QPVITHRETP KPVPASPAPA TVATTPQSLA VPVIATPGIA SSASSVQPPP VAATVATTPQ SLAVPVIVTP GIASSASSVQ PPPVAAEIAK TAPAPRENDS TEATDQAKQI ELEAEKKPAS TPSVPVAAPL LKATFEFDCN SYKIRPSFID VGRKIGLFMK RNPQIIAQIH GHADITGSDD HNLALSEKRA VRTKQYLMKM YNLSADRFEI RTMGSSEPIA DNTTEVGRKK NRRALVIILK
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