Gene Gbem_1127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1127 
Symbol 
ID6781105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp1304882 
End bp1305700 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content57% 
IMG OID642767113 
ProductSel1 domain protein repeat-containing protein 
Protein accessionYP_002137943 
Protein GI197117516 
COG category[R] General function prediction only 
COG ID[COG0790] FOG: TPR repeat, SEL1 subfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.111937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAT CTCTGCCCGG TTTTGTTCTG TTGGCATCTT CTCTAATCTG TTCCCTTGCA 
ATTGCAGCCA GCAATTTGGA TATGGCCGAA AAAGCGCTAA ACGACGGAGA CTATGAAAAG
GCCTTGCAAC TCTACCGGGC GGATGGCGGG GCGCAGGCCC TCAATAACAT TGGCATTATG
TACTATAGAG GAGATGGTGT TCGTCAGGAC AAAGCCGAGG CGGTGCACTG GCTATTGAAG
GCGGCCGCTC TCGGTAATGA GGATGCTCAG GTGAGCCTCG GGCAGATGTA TAGAACCGGC
GACGGCGTGG AGGAGAATCC CGCTGAGGCC GTAAAGTGGT ACCGCAAAGC AGGTGCGCAA
GGCAACCAGG AGGCGCAGGC CGAGCTTGAG CGTTTGTACG CCCTCAAAGA AGACGTAGAG
ACCAAATGGT ACCGTCGTGA CGCCGAGCGC GGAATGGTGC GAGCCCAGGT GAATCTGGGC
CTGATCTATT ACTTTGGTCG TGATCTCGGG GCGGATAAGC GCGAAGCAGC CCTCTGGTTT
AGCAAGGCTG CCGTGCAGGG CGATGCTCAG GCACAATACT ACTACGGCCT GATGCTTTCT
GAAGGTGACG GCATCGATCC GGACGCGGTA GAGGGCGCCA GGCTCTTGCT GTCAGCGGCC
AAGGCTGGGC ACGCCGATGC GCAGTATCAG ATTTCAAAGT GCTACCTGCA TGGTAAAGGC
GTCGCTCGCA ACGCTGACGA GGCTGTGGCA TGGCTTCGCA AGGCCGCCTC GCAAGGTAAC
CATAACGCCG CATCTGAACT TCAGTTGCTC GGGAAGTAG
 
Protein sequence
MKKSLPGFVL LASSLICSLA IAASNLDMAE KALNDGDYEK ALQLYRADGG AQALNNIGIM 
YYRGDGVRQD KAEAVHWLLK AAALGNEDAQ VSLGQMYRTG DGVEENPAEA VKWYRKAGAQ
GNQEAQAELE RLYALKEDVE TKWYRRDAER GMVRAQVNLG LIYYFGRDLG ADKREAALWF
SKAAVQGDAQ AQYYYGLMLS EGDGIDPDAV EGARLLLSAA KAGHADAQYQ ISKCYLHGKG
VARNADEAVA WLRKAASQGN HNAASELQLL GK