Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1127 |
Symbol | |
ID | 6781105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 1304882 |
End bp | 1305700 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642767113 |
Product | Sel1 domain protein repeat-containing protein |
Protein accession | YP_002137943 |
Protein GI | 197117516 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.111937 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAT CTCTGCCCGG TTTTGTTCTG TTGGCATCTT CTCTAATCTG TTCCCTTGCA ATTGCAGCCA GCAATTTGGA TATGGCCGAA AAAGCGCTAA ACGACGGAGA CTATGAAAAG GCCTTGCAAC TCTACCGGGC GGATGGCGGG GCGCAGGCCC TCAATAACAT TGGCATTATG TACTATAGAG GAGATGGTGT TCGTCAGGAC AAAGCCGAGG CGGTGCACTG GCTATTGAAG GCGGCCGCTC TCGGTAATGA GGATGCTCAG GTGAGCCTCG GGCAGATGTA TAGAACCGGC GACGGCGTGG AGGAGAATCC CGCTGAGGCC GTAAAGTGGT ACCGCAAAGC AGGTGCGCAA GGCAACCAGG AGGCGCAGGC CGAGCTTGAG CGTTTGTACG CCCTCAAAGA AGACGTAGAG ACCAAATGGT ACCGTCGTGA CGCCGAGCGC GGAATGGTGC GAGCCCAGGT GAATCTGGGC CTGATCTATT ACTTTGGTCG TGATCTCGGG GCGGATAAGC GCGAAGCAGC CCTCTGGTTT AGCAAGGCTG CCGTGCAGGG CGATGCTCAG GCACAATACT ACTACGGCCT GATGCTTTCT GAAGGTGACG GCATCGATCC GGACGCGGTA GAGGGCGCCA GGCTCTTGCT GTCAGCGGCC AAGGCTGGGC ACGCCGATGC GCAGTATCAG ATTTCAAAGT GCTACCTGCA TGGTAAAGGC GTCGCTCGCA ACGCTGACGA GGCTGTGGCA TGGCTTCGCA AGGCCGCCTC GCAAGGTAAC CATAACGCCG CATCTGAACT TCAGTTGCTC GGGAAGTAG
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Protein sequence | MKKSLPGFVL LASSLICSLA IAASNLDMAE KALNDGDYEK ALQLYRADGG AQALNNIGIM YYRGDGVRQD KAEAVHWLLK AAALGNEDAQ VSLGQMYRTG DGVEENPAEA VKWYRKAGAQ GNQEAQAELE RLYALKEDVE TKWYRRDAER GMVRAQVNLG LIYYFGRDLG ADKREAALWF SKAAVQGDAQ AQYYYGLMLS EGDGIDPDAV EGARLLLSAA KAGHADAQYQ ISKCYLHGKG VARNADEAVA WLRKAASQGN HNAASELQLL GK
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