Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1118 |
Symbol | |
ID | 6781096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 1293202 |
End bp | 1294605 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642767104 |
Product | 40-residue YVTN family beta-propeller repeat protein |
Protein accession | YP_002137934 |
Protein GI | 197117507 |
COG category | [S] Function unknown |
COG ID | [COG3391] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATATCA AGACGGTTGC AATACTTCTT GTCCTTCTGT TCTGCGGTGC CTGCGCCTCG CAGGTCACCC TGCAGAAACC GGTGTCGACT GATGATGGCG AAATCTACCT CTACGCGCAG CCGCTCCCCC AGGAGGCGAC CGGGCTGCGC TTTCGCCTGA GGGAGGTGGT TGCGGTAAAA GGTGACGGTA CGGAGGTACC TCTAACCGTT ACGCTCCCCG ATGTCAGGCC GGAAAACCTG GACCGCCAGC GGCTCATCTG CCGCGGCGAC CTTCCTCCCG GTCCGTACCT GGGCTTTTAC CTGATGGCGG ACCAGGCCTT TAGCCCTGGG GAAAAAGGCG AAAAAGAGCT GACCGTCGCC GAAAAGCGCG AGATGCTTAG CTTCCCTTTC ACTGTGAAGC GCAGACAGGC CGAGCTCTTT TCCCTTTCCT TCAAGGTCGG GGAATCTCTC CAAGGGGCTA CCGGGTTCCG GCCGGTCTTC GTCTGCGGCA CCTTGCCCAA GCCGTTGACC AACCTGACCG GCTACGTCAC CGATTACGCC GCCGGCGCCA TCACAGTTTT CGACAAGAAA TCGGGCGAGG CCCTGGACGT CATAAAAACC GAGCGCGCCC CCAAAACGGT CGTCTTTGAC AGGGACAAGC TGCGGGCATA CGTCGTGGCC TCCGCGGACG ATGCCGTCGA GGTCGTCGAT ATCAGGTCGG GGCAGGTGAT CAACACCATC CGCATGACCA GCGGGGACCG GCCCTGTGAT GCTCTGCTGA CTCCCGACGG GGCTACCCTG ATCGTGGTCA ATCAGGGGAC CAACACGGTG AGTTTCATCG ACCCCAATTC CAACTTCGAG TCGACCAGGG TCAGGGTCGG CAACAGCCCG GGGAGCATAA TCCTCGACCC CCAAGGGAAG AGGGCGTACA TCTTCAACAC TCTCTCGAGC AACTTCTCGG TGCTGGATGT AAGCGCACGG GTAGTGCTGG CCACGGTGCC GACCGAGTCG GTGCCGGTCA GGGGTGATTT CAGCAGGCAG GGGGACAGGC TTTACGTCTT CCACCAATGG TCTCCCTCCC TGCTGGTCTA CGACACGGCG TCCCTCACCG TTTTCAAAAG GATCTATACG GGGCTTGGGG TGAGCGCCGT CAAGGTGGAC CGCAACACCG ACCGCCTGTA CGTGGCGAAG AAGGACAGCC GGGTGATCGA GGTCTACGAC CCTTTTTCAC TGATACCGAT CGATTTTCTG GAAGCGGGAG GGTGGGCGTC CTACATGCTC ATTGACGCGG ATGAGAACAA CTTGTTGCTG GTGCTTCCGG AGAGAAACGC CCTCCAGAGC ATCAACCTGA TAAGTAAAAG AAGCCGTTTC TTCATGGACA CAGGCCGCGC ACCCTACTGG TCTGCAATCA TGGGTGAGAG GTAA
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Protein sequence | MHIKTVAILL VLLFCGACAS QVTLQKPVST DDGEIYLYAQ PLPQEATGLR FRLREVVAVK GDGTEVPLTV TLPDVRPENL DRQRLICRGD LPPGPYLGFY LMADQAFSPG EKGEKELTVA EKREMLSFPF TVKRRQAELF SLSFKVGESL QGATGFRPVF VCGTLPKPLT NLTGYVTDYA AGAITVFDKK SGEALDVIKT ERAPKTVVFD RDKLRAYVVA SADDAVEVVD IRSGQVINTI RMTSGDRPCD ALLTPDGATL IVVNQGTNTV SFIDPNSNFE STRVRVGNSP GSIILDPQGK RAYIFNTLSS NFSVLDVSAR VVLATVPTES VPVRGDFSRQ GDRLYVFHQW SPSLLVYDTA SLTVFKRIYT GLGVSAVKVD RNTDRLYVAK KDSRVIEVYD PFSLIPIDFL EAGGWASYML IDADENNLLL VLPERNALQS INLISKRSRF FMDTGRAPYW SAIMGER
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