Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1116 |
Symbol | |
ID | 6781094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 1290030 |
End bp | 1291355 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642767102 |
Product | cytochrome c family protein |
Protein accession | YP_002137932 |
Protein GI | 197117505 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.598928 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACTGA CCAAGATTCT CGCAACAACC GCAGTCCTCA GTCTTGCTAC CGCTGGTAGC GCCCTTGCTT TCCACTCCGG CGGCGTCGCC GAGTGCGAAG GTTGCCACTC CATGCACAAC TCGTATGAAG GTGCAGCCAA TGTGACCGGC ATGGCCCAGT ATCAGTCCGG CCCGTACCTC CTGAAAGCTC AGGACCAGTC CGGTGCTTGC CTCAACTGCC ACCAGGCTGC CGACACCACC CCGGGCCCCG TTACCGGTAA GGACAATGGC TACCACATCT CCACCGCAAA CGTTGTTGCA GCTGACAGCA CCACCCCGGT CGAGCTGACC CCGGGCGGCG ACTTCGCTTG GCTCAAGAAG ACCATGAGCG GCTCCATCCG CGGCACGGCT ACCTCTTGGG AAGGCGATCG TCACGGCCAC AACGTGATCG CTGTCGACTT CGGCTACACC CAGGACAAGG TTCTGACTGC TGCCCCTGGT GGCACCTACC CGGCAGCCAA CCTGGCCTGC TCCTCCTGCC ACGATCCCCA TGGCAAGTAC CGTCGTCTTG CCGACGGCAC CAAGGCCACT ACCGGTCTGC CGATTTTCAA CTCCGGTTCC TACGTCAACA GCAAAGACCC GATCGCCAGT GTTTCCGCCG TCGGCGTGTA CCGCCTCCTC GCAGGCGTGG GCTACCAGCC GAAGTCCCTT ACCGGCTCCT ACGCCTTCGC TAACCCGTCT CCGGACGCAG TTGCTCCGGC CAGCTACAAC GGTCTCAACG ACACCATCGC AGGCGGTAAA GACCGCGTTG CTTACGGCCA GGGTATGTCC GAGTGGTGTG CTAACTGCCA CACCGCAATG CACAATGACA CCTACACCTC CGGCACCAAA AGCCTGGTTC ACCCGGCAGG TAACGGCGGC AAGCTGACCG GCGCCATCGC CGGCAACTAC AACGCCTATG TTTCCTCCGG CATCAACGGC ACCCCGGCTT CCAACGGCTA CAGCGCCCTG GCTCCGTTCG AACTCGGTTC TGGCGACTAC GCCGCCATCA AAACCTTCCA GGCTGCTCCG GCTGCCGCCA GCACCAGCAA CAACGTGCTC TGCCTCTCCT GCCACCGCGC TCACGCTTCC GGCTTTGAGA GCATGGCCCG CTACTACCTG GGCAACGAGT TCATGACCGT AGCTGACGCA AGCAACGCAG CCGCTTACGA CTCCAGCACC ACCGAGAACA AGATCAACAC CGGCTACAGC GTCACCCAGC AGCAGAACGC TTACAACGGT CGTCCGGCTT CCCTCTTCGG ACCGTACGCA CGTGACTACT GCAACAAGTG CCACGCTAAA GACTAG
|
Protein sequence | MKLTKILATT AVLSLATAGS ALAFHSGGVA ECEGCHSMHN SYEGAANVTG MAQYQSGPYL LKAQDQSGAC LNCHQAADTT PGPVTGKDNG YHISTANVVA ADSTTPVELT PGGDFAWLKK TMSGSIRGTA TSWEGDRHGH NVIAVDFGYT QDKVLTAAPG GTYPAANLAC SSCHDPHGKY RRLADGTKAT TGLPIFNSGS YVNSKDPIAS VSAVGVYRLL AGVGYQPKSL TGSYAFANPS PDAVAPASYN GLNDTIAGGK DRVAYGQGMS EWCANCHTAM HNDTYTSGTK SLVHPAGNGG KLTGAIAGNY NAYVSSGING TPASNGYSAL APFELGSGDY AAIKTFQAAP AAASTSNNVL CLSCHRAHAS GFESMARYYL GNEFMTVADA SNAAAYDSST TENKINTGYS VTQQQNAYNG RPASLFGPYA RDYCNKCHAK D
|
| |