| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1107 |
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| Symbol | |
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| ID | 6781085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1279561 |
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| End bp | 1280373 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642767093 |
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| Product | Sel1 domain protein repeat-containing protein |
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| Protein accession | YP_002137923 |
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| Protein GI | 197117496 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00367364 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAC GATTACCGGC AATCATCATC GCATTATTGG TCTGCTGGAG CGGCTCGTGC
TACGCGGATT TTCAGGAGGC CGAGAGGGCA TTCGACAAGG GTGATTACCC CTCCGCTCTC
GCCTTATACC GGGCCGATAA GACACCAGAG TCGTTTAACA AACTAGGCGT GCTTTACTAC
AATGGCCTCG GCGTCGGCAG GAATGTCAGT GAGGCGCTGC ATTGGTTTCG CCGGGCGGCG
GATCTGGGGA GTGCGGAAGC CCAGGCCAAT CTCGGCCAAC TGTACGAAAC CGGCGATGGC
GTCACCATGG ACCTTGCGGA AGCTATGAAG TGGTACGGCA AAGCTGCCGC TGGCGGGGAC
CCCGACGCCC AGCACGATTT TGACCGTCTG CGCGCGGAGA GTGAGCCGAG AAGGATCCGC
TGGTACCGCA GGGATGCCCT ACTCGGTCAT GTCACGGCCC AGTATAACCT TGCCGACGCC
TACTATCATG GCGAAGAAGT GCCTCAGGAC AAGCGCGAGG CGGCGAAGTG GTACCTGAAG
GCTGCGGAGC AGGGGAACGT TCCGGCGCAG TACATGCTGG GGCTCATGCT GTTGCAAGGA
GACGGCGTGC AAAACGCTTC GGCTGAAGGA GTCGCCTGGC TGCGAAAAGC CGCCTCCTCC
GGTCATCGGG AAGCCCAGTA CCAGATGGGC CGATGCTTGC TGCAGGGGAT TGGAGTGCGA
CGCGACAGTG AGGAGGCCGT CCTGTGGCTG CGAAAAGCCG CGGCACAGGG AGAGCCGACA
GCGGTGGCTG CATTGAAAGA GGTGGGAAAA TGA
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| Protein sequence | MKRRLPAIII ALLVCWSGSC YADFQEAERA FDKGDYPSAL ALYRADKTPE SFNKLGVLYY
NGLGVGRNVS EALHWFRRAA DLGSAEAQAN LGQLYETGDG VTMDLAEAMK WYGKAAAGGD
PDAQHDFDRL RAESEPRRIR WYRRDALLGH VTAQYNLADA YYHGEEVPQD KREAAKWYLK
AAEQGNVPAQ YMLGLMLLQG DGVQNASAEG VAWLRKAASS GHREAQYQMG RCLLQGIGVR
RDSEEAVLWL RKAAAQGEPT AVAALKEVGK
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