Gene Gbem_1077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1077 
Symbol 
ID6781055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp1249567 
End bp1250889 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content57% 
IMG OID642767063 
ProductO-antigen polymerase 
Protein accessionYP_002137893 
Protein GI197117466 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3307] Lipid A core - O-antigen ligase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.7973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGGGA TGTTGGCATT ACTTGCCTGT TTTGCCTTAG TCACTTGGCT CTTTGTTCGG 
GATCAGCGGG TGCGCCCGAT GCCCTCCCCC GAGTCGTGGC TACCCTTTGC GTGGTTCGTG
ATCGTCGGGA CCAGACCGCT CTCCGCCTGG TTTTCGGTCC AGGAGGAGGA TTCCGCTGAC
GCTTTCCTGG AGGGAAGTCC GCTGGACCGA TACTCTTTGA TGGCGTTGAT CCTGATCGCA
TGCGTGGTCC TGCTGCGCAA GCGACCGCAA TGGTTTGGGG TCCTTCGTAG CAACTTCTGG
TTCATGGCCT TCATCGCCTA CTGCGCTGTC AGCGTTGTCT GGTCCGATTA CCCCTTTGTC
AGTTTCAAAA GATGGGTCCG GGAGCTCGGT AATGTAGTGA TGGTCCTGGT AATCCTCACC
CAGGATGATG CAGGCAAGAC CACCCGTGCA TTGTTGGCAA GGTTCGCTTA TCTAGTCATC
CCGCTTTCTG CGGTCCTGAT ACTCTACTTT CCCGCCCTCG GCACCTACTA CAGCGATCTT
GAGGGTATCT CCTACTGTGG CGTTGCGACC TATAAGAACA TGCTCGGCAG CATCATGTTC
ATCTCTGGGG TCTATCTCGC CTGGGAGTTA CTCTACGTGC CTGACGGGAA GGACACCAAG
GTTTCAGATC TAGCCCCATT GGCCGCCCTA TGGGGGATGG CCGTGTGGCT CCTTGTTATC
TCCAGCAGTT CTACCGCCCT TATCTGTCTG GCGATGGGGT CCGCTGTTCT GCTGCTGATG
AAACTCACTT TAGCCCAGAG GCAGGTCCGC CATCTGGGGA CCTACACACT GCTTGGCGCC
CTGCTCTTGT TGGGACTCTT CTCTCTCCAA GGAACGCTGG AGATAATGAC GGGGGCGGTG
GGGCGGGATC TCACCTTCAC CGGTCGCACG GAGTTATGGG GGGACGTCCT TAGAGAACCT
ATCAACCCCC TGCTTGGGAC TGGCTACCAG AGTTTCTGGC TCGGGGCACG CGCCGACGAC
CTCTGGGAGC GTTATCTTTT CCACCCGCGG CAATCCCACA ACGGCTACCT GGAAACCTAC
CTGAACGGCG GGTTGCTTGG CCTGCTCCTG CTACTCGCAC TCATCGCCTC GATAGGAAAG
CGCTTGAAGA CTGGGCTCCT CGCCGGCAAC AGGTTCACCG TGCTCCTCTT TTCCTTCTGG
GTCGCGTCGT TATTCTACAA TTTTACGGAA TCGCGGTTCG TAGGGCCAAA TCTGATCTGG
ATCCTATTGA GCGTAGCCGC GTTATACCAC CCCGCCGAAG CAGACCTGCA ACAGGCGGGA
TAG
 
Protein sequence
MLGMLALLAC FALVTWLFVR DQRVRPMPSP ESWLPFAWFV IVGTRPLSAW FSVQEEDSAD 
AFLEGSPLDR YSLMALILIA CVVLLRKRPQ WFGVLRSNFW FMAFIAYCAV SVVWSDYPFV
SFKRWVRELG NVVMVLVILT QDDAGKTTRA LLARFAYLVI PLSAVLILYF PALGTYYSDL
EGISYCGVAT YKNMLGSIMF ISGVYLAWEL LYVPDGKDTK VSDLAPLAAL WGMAVWLLVI
SSSSTALICL AMGSAVLLLM KLTLAQRQVR HLGTYTLLGA LLLLGLFSLQ GTLEIMTGAV
GRDLTFTGRT ELWGDVLREP INPLLGTGYQ SFWLGARADD LWERYLFHPR QSHNGYLETY
LNGGLLGLLL LLALIASIGK RLKTGLLAGN RFTVLLFSFW VASLFYNFTE SRFVGPNLIW
ILLSVAALYH PAEADLQQAG