Gene Gbem_1064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1064 
Symbol 
ID6781042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp1236102 
End bp1237238 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content59% 
IMG OID642767050 
Productsugar transferase 
Protein accessionYP_002137880 
Protein GI197117453 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGTG AAAGATGGAT ACAACAGGTG TTGTGGCGTT TCTTGCCATG GCGCAGAAAG 
GCAAGGGAAA CGTTGCCAAA GGGGTTGCAA CCGGAAACCC GCTTCCGGCA GCAACTCATC
CAGGAGCGGA AGCGGGCCGA GAGGGCGAAC AAGCCGCTTT TGGTCATGCT CGTCAACCCT
GACTGTGTCG CAGCCCGCGG GGAAGCGGAT TCGGTTGTCG GCTGCGTGGG GAGGGGGCTC
CAAAGCTGCC TGCGCGAAAC GGATATCTGT GGAGTGCTTA ACGACGGAGC CCTGGTTGGG
GTGATCCTGA CGGAGATCTG GGTTGACGAC CTCGACAAGG TGAAGAAAGC GGTGGCCAGA
AAGGCGCGGG AGAAGCTGAG CCAGCTATTC GAAGACGAGG TAGCGCGGCG CGTAACCATC
AGTTTCCGCA TCTATCCGGA AAGCGGTGGC AAAAGCGGCG CCTTCGACAT GATCTTTTAT
CCCGAGCAGG TGGAGAAGAG TATCGAAGGG ACGGCAGGTG AAATAGCCAA GCGTGGGCTG
GACCTCCTTG GGAGCGCAAC GGGGCTGGTG CTGCTCGCCC CCGCTTTCGC ACTGATCGCA
TCGGCCATCA AGTTAACCTC AGACGGGCCG GTCTTTTTCC AACAGCAACG GATCGGTTGC
AACGGCAGGA AGTTCAAGCT TTTGAAGTTC CGCACCATGT ATATCGGCAA CGATGACCAG
ATCCACCGTG ACTACGTCAA GCTGCTGATC CAGGGTAAGG TCGCCGAGGA GCAGGGAGGG
GTCTTCAAGA TCACCGTGGA CCCCAGGGTT ACCCCGATCG GGAAGGTGTT GAGGAAGTAC
AGCCTGGATG AGCTGCCGCA GCTTTTCAAC GTGCTGAAAG GGGAGATGGC CCTGGTGGGA
CCGCGACCCC CGATCAGCTA TGAACTGGAG CATTACAGCG GGTGGCAGCG CAACCGGCTG
ATCGGCAAAA GGCCCGGCAT AACCGGTGCG TGGCAGGTGA GCGGTCGCAG CAGCACGACC
TTTGACGAAA TGGTACGGCT CGACCTCAGG TATTTGAAGG GGTGGAGCCT CGCGCTGGAC
TTCAAGATCC TGCTGAAGAC ACCGCTGGCC GTTCTCAAGT GCAAGGGCGC CTACTGA
 
Protein sequence
MARERWIQQV LWRFLPWRRK ARETLPKGLQ PETRFRQQLI QERKRAERAN KPLLVMLVNP 
DCVAARGEAD SVVGCVGRGL QSCLRETDIC GVLNDGALVG VILTEIWVDD LDKVKKAVAR
KAREKLSQLF EDEVARRVTI SFRIYPESGG KSGAFDMIFY PEQVEKSIEG TAGEIAKRGL
DLLGSATGLV LLAPAFALIA SAIKLTSDGP VFFQQQRIGC NGRKFKLLKF RTMYIGNDDQ
IHRDYVKLLI QGKVAEEQGG VFKITVDPRV TPIGKVLRKY SLDELPQLFN VLKGEMALVG
PRPPISYELE HYSGWQRNRL IGKRPGITGA WQVSGRSSTT FDEMVRLDLR YLKGWSLALD
FKILLKTPLA VLKCKGAY