Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1064 |
Symbol | |
ID | 6781042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 1236102 |
End bp | 1237238 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642767050 |
Product | sugar transferase |
Protein accession | YP_002137880 |
Protein GI | 197117453 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCGTG AAAGATGGAT ACAACAGGTG TTGTGGCGTT TCTTGCCATG GCGCAGAAAG GCAAGGGAAA CGTTGCCAAA GGGGTTGCAA CCGGAAACCC GCTTCCGGCA GCAACTCATC CAGGAGCGGA AGCGGGCCGA GAGGGCGAAC AAGCCGCTTT TGGTCATGCT CGTCAACCCT GACTGTGTCG CAGCCCGCGG GGAAGCGGAT TCGGTTGTCG GCTGCGTGGG GAGGGGGCTC CAAAGCTGCC TGCGCGAAAC GGATATCTGT GGAGTGCTTA ACGACGGAGC CCTGGTTGGG GTGATCCTGA CGGAGATCTG GGTTGACGAC CTCGACAAGG TGAAGAAAGC GGTGGCCAGA AAGGCGCGGG AGAAGCTGAG CCAGCTATTC GAAGACGAGG TAGCGCGGCG CGTAACCATC AGTTTCCGCA TCTATCCGGA AAGCGGTGGC AAAAGCGGCG CCTTCGACAT GATCTTTTAT CCCGAGCAGG TGGAGAAGAG TATCGAAGGG ACGGCAGGTG AAATAGCCAA GCGTGGGCTG GACCTCCTTG GGAGCGCAAC GGGGCTGGTG CTGCTCGCCC CCGCTTTCGC ACTGATCGCA TCGGCCATCA AGTTAACCTC AGACGGGCCG GTCTTTTTCC AACAGCAACG GATCGGTTGC AACGGCAGGA AGTTCAAGCT TTTGAAGTTC CGCACCATGT ATATCGGCAA CGATGACCAG ATCCACCGTG ACTACGTCAA GCTGCTGATC CAGGGTAAGG TCGCCGAGGA GCAGGGAGGG GTCTTCAAGA TCACCGTGGA CCCCAGGGTT ACCCCGATCG GGAAGGTGTT GAGGAAGTAC AGCCTGGATG AGCTGCCGCA GCTTTTCAAC GTGCTGAAAG GGGAGATGGC CCTGGTGGGA CCGCGACCCC CGATCAGCTA TGAACTGGAG CATTACAGCG GGTGGCAGCG CAACCGGCTG ATCGGCAAAA GGCCCGGCAT AACCGGTGCG TGGCAGGTGA GCGGTCGCAG CAGCACGACC TTTGACGAAA TGGTACGGCT CGACCTCAGG TATTTGAAGG GGTGGAGCCT CGCGCTGGAC TTCAAGATCC TGCTGAAGAC ACCGCTGGCC GTTCTCAAGT GCAAGGGCGC CTACTGA
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Protein sequence | MARERWIQQV LWRFLPWRRK ARETLPKGLQ PETRFRQQLI QERKRAERAN KPLLVMLVNP DCVAARGEAD SVVGCVGRGL QSCLRETDIC GVLNDGALVG VILTEIWVDD LDKVKKAVAR KAREKLSQLF EDEVARRVTI SFRIYPESGG KSGAFDMIFY PEQVEKSIEG TAGEIAKRGL DLLGSATGLV LLAPAFALIA SAIKLTSDGP VFFQQQRIGC NGRKFKLLKF RTMYIGNDDQ IHRDYVKLLI QGKVAEEQGG VFKITVDPRV TPIGKVLRKY SLDELPQLFN VLKGEMALVG PRPPISYELE HYSGWQRNRL IGKRPGITGA WQVSGRSSTT FDEMVRLDLR YLKGWSLALD FKILLKTPLA VLKCKGAY
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