Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1058 |
Symbol | |
ID | 6781036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 1231266 |
End bp | 1232141 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642767044 |
Product | Flp pilus assembly protein CpaB |
Protein accession | YP_002137874 |
Protein GI | 197117447 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3745] Flp pilus assembly protein CpaB |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCGCC CTAAAGCGGT AATTCTCGTC TCGGTGTTCG CGCTGTTCTT CGCGGCGATG GCCGCTTGGC TTGCCTACAG TTTCCTGCAG CAGGAGGTCA AAAGCGCCAA GGCGGCCCAG CCCCAAAGGA TAGTGGTCGC CGCAGTCGAC ATCCCCATCG GGACCGCGAT CACCCCAGCG CAGCTCAAGG TCGCCTCCTG GCCCAAGGAC AGCATCCCCC CGGGGAGCGC CCGGGGTATC GAAGCGGTGG CGAACCGCGT TGCCATCCGC CCCATAACCG GCGGCGACGC GGTCACCGAG GCAAAGCTAA AGCCCAGGTC CGGCGCACCG GGAGCCGGCT TCATGACCTA CGTCGTGCCG CAGGGGCACC GTGCGGTGAC GGTGGCAGTG AACGAGGTGG CGGGAGTGGC AGGTTTTCTA ACCCCGAGCG ACCGCGTGGA TGTGATCGTT ACCACGCCGG TTCCAGGCAA CGAGAAGGAG AACATCAGCA AGATCGTACT GGAAAACGTC CCCATCCTGG CCACCGGGCA GGTGACGGAC CAGAAGGAGG GAAAACCGGT CGTGGTCCCG ACGGTCACCC TCGACCTCGT CCCGGACGAT GCGGAAAAGC TGGTCCTCTC CGCCAGCAAG GGTTCGCTGC AGCTTTTGCT GCGCAACATT TCCGACAGCT CCCATGTCGA CTCCAAGGGA GCCACCATAG GAAAGGTGCT CTACGGCAGC GCGCTTCCCG TGAAGGTCGC CACGCTGCAC CCCCCTCCCC CGGCAAAGAG GGAGCCCAGG TCCGCCGCCG CGATGAGGAC TCCCCCGCCG CGCCCAAGCT ACACCCTGGA CATCGTCCGG GGAACCGAGA AGGTTTCCAA GCAGTACGCC GAATAA
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Protein sequence | MTRPKAVILV SVFALFFAAM AAWLAYSFLQ QEVKSAKAAQ PQRIVVAAVD IPIGTAITPA QLKVASWPKD SIPPGSARGI EAVANRVAIR PITGGDAVTE AKLKPRSGAP GAGFMTYVVP QGHRAVTVAV NEVAGVAGFL TPSDRVDVIV TTPVPGNEKE NISKIVLENV PILATGQVTD QKEGKPVVVP TVTLDLVPDD AEKLVLSASK GSLQLLLRNI SDSSHVDSKG ATIGKVLYGS ALPVKVATLH PPPPAKREPR SAAAMRTPPP RPSYTLDIVR GTEKVSKQYA E
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