| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1055 |
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| Symbol | |
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| ID | 6781033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 1227314 |
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| End bp | 1228627 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642767041 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_002137871 |
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| Protein GI | 197117444 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCTCG ATGGTATCAA GCCTCAGGCG GTGCAGGGTC CGGCAGCGAC GGAATCGGAA
CTCTTCAAGG AGATGAAGAC CCGGATCCAC CGCCGCCTGA TCGACAGCAT CGACCTCGCC
AAGATGGACC TGATGCGCAA CAACGAGATG GTGAGCCAGA TCCGCGGCGT AATAGAGAAC
CTCATCGTCG GCGAGGGGGT CCCGCTGAAC CAGATGGAGA GGGACCGGCT GGTGCTGGAG
ATCCAGCACG AGACCTTCGG CCTCGGGCCG CTCGAGCCTC TTCTGGCCGA CGACCAGATC
TCCGACATCC TGGTGAACGA CAGCTCCAAC GTCTACATCG AAAAGGGGGG GAAGCTGCAA
AAGACCGAGG TCTGCTTCCG GGACAACGCG CACCTGATGC AAATAATCGA GCGCATCGTC
TCCAAGATCG GGAGAAGGAT CGACGAGTCC TCCCCCTACG TCGACGCGAG GCTTCCCGAC
GGCTCCCGCG TGAACGCCAT CATCCCCCCC CTGGCGCTGA ACGGCCCTGT GCTCTCCATC
AGGCGCTTCG GGCTGGAGCC GCTGGTCATG AGGGACCTGA TCAAGCTGCA GGCCCTGGAC
CAGAGGATGG CGGAGCTTTT GGAGGCGGCG GTGCAGACGA GGCTCAACAT CCTGATCTCC
GGGGGTACCG GCACCGGCAA GACCACCCTC CTGAACGTCC TCTCCGCCTT CATCCCCGGG
GGGGAGCGGC TCATCACCAT CGAGGATTCG GCCGAGCTGA ACCTGAAGCA GGAGCACGTG
GTGCGGCTGG AAACCAGGCC CCCCAACCTT GAGGGGCGCG GCGAGGTGAC CTCGCGTGAC
CTGCTGAAAA ACGCGCTGAG GATGCGGCCG GATCGAATCA TCATCGGCGA GGTGCGCGGC
GGCGAGGCGC TCGACCTGCT GCAGGCGATG AACACCGGCC ACGACGGCTC GCTCTCCACG
GTCCACGCCA ACACCACCCG CGACGCCCTC TCACGCATGG AAACCATGGT CCTTATGGCC
GGGCTGGACC TTCCGGAGAG GGCCATCAAG GAACAGATGG CCTCGGCCCT AGACCTGGTG
GTGCAACTGG TCCGCTTCTC CGACGGGACC CGGAAGGTGG TGAAACTCTC CGAGATCACC
GGGATGGAGG GGAACACCAT CGTCATGCAC GACATCATCG TGTTCCTGCA AAAGGGGATC
GACCGGCAAG GGAACGTGAT CGGCGAATTC CGCGCCACCG GGGTGAGGCC GCGCTTTGCC
GAGCGCTTCA AGCTCTACGG GTTCGAGCTC CCCGCCATCA TGTTCGAGAA CTAG
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| Protein sequence | MLLDGIKPQA VQGPAATESE LFKEMKTRIH RRLIDSIDLA KMDLMRNNEM VSQIRGVIEN
LIVGEGVPLN QMERDRLVLE IQHETFGLGP LEPLLADDQI SDILVNDSSN VYIEKGGKLQ
KTEVCFRDNA HLMQIIERIV SKIGRRIDES SPYVDARLPD GSRVNAIIPP LALNGPVLSI
RRFGLEPLVM RDLIKLQALD QRMAELLEAA VQTRLNILIS GGTGTGKTTL LNVLSAFIPG
GERLITIEDS AELNLKQEHV VRLETRPPNL EGRGEVTSRD LLKNALRMRP DRIIIGEVRG
GEALDLLQAM NTGHDGSLST VHANTTRDAL SRMETMVLMA GLDLPERAIK EQMASALDLV
VQLVRFSDGT RKVVKLSEIT GMEGNTIVMH DIIVFLQKGI DRQGNVIGEF RATGVRPRFA
ERFKLYGFEL PAIMFEN
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