| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1054 |
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| Symbol | |
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| ID | 6781032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 1226342 |
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| End bp | 1227304 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642767040 |
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| Product | type II secretion system protein |
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| Protein accession | YP_002137870 |
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| Protein GI | 197117443 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTATC CCATCGTGGC GCTTATATTC CTGGCGGCCT TCGGCGTCTT CCTGGCGGCC
TTTCTCTACC TCGCGCAACG GCAGACGTCC GGCAGGACGG TGCTGAAAAG ACGGCTGCAG
ACCATGGCAG GCGAGAGGCA GGGGGAGATC CCGGAGGAGT TCCTTTCGGT GATCAGCAGG
GAAGCGGAAC GAGCCTCGGA GCTCCTCACC CGGGCGCCTC AGATGCGCAC CCTGGGGAAG
CGTCTGGAGC AGGCGGGCAT CCAGCTTTCC GCCTCATTGC TTCTTGGATC CACCATGGCG
GCGGCGCTCG GTCTGGCCAT CCTCTTGGGG TTGAAGACGC AATCTCCCCT GGTCGGGTTC
CTCGCCGCGG TGGTCGTACT GCTCGTCGCT GAACTGATGC TCCGGGTGAA GACGGAGCGA
CGCAGCATCA AGTTCACCGA GCAGTTTCCC GACGCCCTGA GCATCGCCGC CCGTTCGCTG
AGGGCCGGGC ATTCCTTCCC GACCGCCATC CAACTGGTCG GGCAGGAGGT CCCCTCCCCG
GTAGGCCCCT TGTTCAAGAC AGCCTACGAG CAACAGCAAC TGGGTCTCAG GATGGTGGAC
GCCCTGATGA GGATGAACGA GAGGATCGAC AGCCTCGACC TCAGGTTCTT CACCACCCTG
GTCGCCATCA ACAGCGACAT AGGCGGGAAC CTCTCCGAGC TTTTGGACAA GCTGGCGATG
ACCATCAGGG AGCGGCTCAA GATACGGCGC CAGGTACAGG TCTACACGGC ACAGGGGCGG
CTCTCCGGCT ACGTGCTGGC GGCGCTCCCT ATAGCCACCT TCGGCATCTT CAGCGTGTTG
AACCCAAACT ACGAGCGGGC ACTCATCCGC GAACCGCTGG GGCTGTATGT CCTGGCCGGC
GCCGCCGCCA TGCAGATAAT CGGGTTTCTC GTGATACGCA AGATCGTCAG AATCAGGATA
TAG
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| Protein sequence | MLYPIVALIF LAAFGVFLAA FLYLAQRQTS GRTVLKRRLQ TMAGERQGEI PEEFLSVISR
EAERASELLT RAPQMRTLGK RLEQAGIQLS ASLLLGSTMA AALGLAILLG LKTQSPLVGF
LAAVVVLLVA ELMLRVKTER RSIKFTEQFP DALSIAARSL RAGHSFPTAI QLVGQEVPSP
VGPLFKTAYE QQQLGLRMVD ALMRMNERID SLDLRFFTTL VAINSDIGGN LSELLDKLAM
TIRERLKIRR QVQVYTAQGR LSGYVLAALP IATFGIFSVL NPNYERALIR EPLGLYVLAG
AAAMQIIGFL VIRKIVRIRI
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