Gene Gbem_1046 details

Gene Information

• Locus tag: Gbem_1046
• ID: 6781024
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: -
• Start bp: 1218365
• End bp: 1220419
• Gene Length: 2055 bp
• Protein Length: 684 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 642767033
• Product: CheA signal transduction histidine kinase
• Protein accession: YP_002137863
• Protein GI: 197117436
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0643] Chemotaxis protein histidine kinase and related kinases

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCACTC CCAATGGAGA ACAAGACGGC ATCGATCTCA AACGCTTCAA CCAGGTCTTC 
TTCGAGGAAT GCGCCGAGAA CTTGGCCGAG ATGGAGCAGA TCCTCATAGC GCTTGGAGAC 
TGCGAGCCGG ACCACGAGCA GTTGAACGCC ATCTTCCGCG CCGCCCACTC CATCAAGGGT 
GGGGCAGGCA TCTTCGGCTT CGACGACATG ACGGTGGTGA CCCATGTCAT GGAGTCGCTG 
CTCGACCTTT TGAGAAACCA CGAGATCCCC TTCCGGCCGG AGATGATCGA CCTGTTCCTG 
GAGGCGGGCG ACGCCATATC CATGCAGCTT GCCGGCCACC GGGAAGGAAA GCCGGTGTGC 
CAGGAGGCTA TCGACCAGGT GCGCGCCAAG CTGCAGCAAC TGGCGAAACC AGGCGCAAAC 
GACAGCGGCG CTTTGCAACC CGCAACGGAG CAGGCTCCGC AGCAGGAGGC CTCCCCCCTC 
CCCGTCCGCT ACCGGCTCAC CTTCTCCCCG GATCCGGAGA TCTTCCACCG CGGCATCCGC 
ATCGAGAGCA TCGTCTCCGA GCTCTCCGAA CTTGCGCTTG AAGGGGAATT CCACTGCCGG 
GCGTACCTCG CCGAAACGCC GGAGCTGGAA GATCTCGATC CCTTGCGCTG CGTCACGCGC 
TGGGAATTTA CCCTCGCCTC GCCGGCCGGC AGAGAAAAGC TGGTTGAGGC GTTCATGTTT 
GTCGCCGAAG AGGAACAGCT GCAGGTCGAG GAGCTGCCGT GGCAGGAGCG GCGCGCAGAG 
GCCGCGAAGA CTGACGGCGC TCCCGAAGCC GTCCCCCCCG CCCACCCCGG CCGGCGCGCC 
TACGACGCTA ACGAGTTGGC GCCGGGCGCC TTCGGGCGGC GCGGGGCGGA GGCCGAGTCC 
TCCATCCGGG TCAACGTGGG GAAGGTGGAC CAGCTGGTCA ACCAGGTAGG GGAGCTGCTG 
ATTACCCAGG CCATGCTGGC GCAGACAGCC GCGGGCCTCG ATCCCATCCT GCACCAGGCG 
CTGCAGCAGG GGCTGGCCCA GTTGGAGCGC AACACCCGCG ACCTGCAGGG GAGCGTGATG 
TCGATCCGGC TAGTCCCCAT CAGCATGGTC TTCAGCCGTT TTCCCCGCCT GGTGCGCGAA 
CTGGCCGGAA AGCTCGGCAA GCAGGTGGAG TTCAGGACCA CAGGAGAGGG GACCGAGCTG 
GACCGGGGGC TCATCGAGAA GATCGCCGAC CCGCTCACCC ACCTGGTAAG AAACGCCCTG 
GACCACGGGC TGGAGACCCC GCAGGCGCGC CTTGCCAACG GCAAGGAGCC TGGCGGGACC 
CTGCAGCTTC GGGCTTCGCA GGTGGGGGGG AGGATCGTCA TCGACGTGAT CGACGACGGC 
GCGGGGCTGA ACCGCGGGCG CATACTCGCC AAGGCGCAGG AGCGCGGCAT CCCCTGCTCC 
GACTCCATGA CCGACGACGA CGTTTGGCAG CTCATCTTCG CCCCGGGGTT CTCCACCGCC 
GAGGAGGTGA CCGACGTCTC CGGGCGCGGC GTGGGGATGG ACGTGGTGCT GAAGAACGTG 
CAGTCCATAG GCGGCAGGGT CCAGATCGCC TCCGAAGCGG GGATGGGCTC GCGCTTCACC 
ATCAGCCTCC CGCTCACCCT CGCCATCCTG GAGGGGCTCA CCGTCGCCGT GGGGGGGGAG 
AAATTCATCA TCCCCATCAA CGTGGTGATC GAGTCGCTGC AGCCCAAGCC GGACCAGCTG 
AAAACGGTGA ACGGCAGGCA GGTGGTCCAG GTGCGGGGAG AATACCTCCC CATCATCAGG 
CTGCACCGGA TCTTCAACCT GGAGTCCCAA GTGGTCGAGC CCGAACACGG GATACTGATA 
ATGGTGGAGG GGGACGGGGA GCGCGGGGCC ATCCTCGTGG ACGCGCTTTT GGACGAGCAG 
CAGGTGGTGG TGAAGAGCAT AGAAACGAAC TACCGGCGGG TCGAGGGGAG CGCGGGAGCG 
ACCATCCTCG GGGACGGGCG CGTCGCGCTC ATCCTCGACC TGACCGAGTT GTTCCTGATG 
CACAAGAAGC TTTAA 

 

Protein sequence

MTTPNGEQDG IDLKRFNQVF FEECAENLAE MEQILIALGD CEPDHEQLNA IFRAAHSIKG 
GAGIFGFDDM TVVTHVMESL LDLLRNHEIP FRPEMIDLFL EAGDAISMQL AGHREGKPVC 
QEAIDQVRAK LQQLAKPGAN DSGALQPATE QAPQQEASPL PVRYRLTFSP DPEIFHRGIR 
IESIVSELSE LALEGEFHCR AYLAETPELE DLDPLRCVTR WEFTLASPAG REKLVEAFMF 
VAEEEQLQVE ELPWQERRAE AAKTDGAPEA VPPAHPGRRA YDANELAPGA FGRRGAEAES 
SIRVNVGKVD QLVNQVGELL ITQAMLAQTA AGLDPILHQA LQQGLAQLER NTRDLQGSVM 
SIRLVPISMV FSRFPRLVRE LAGKLGKQVE FRTTGEGTEL DRGLIEKIAD PLTHLVRNAL 
DHGLETPQAR LANGKEPGGT LQLRASQVGG RIVIDVIDDG AGLNRGRILA KAQERGIPCS 
DSMTDDDVWQ LIFAPGFSTA EEVTDVSGRG VGMDVVLKNV QSIGGRVQIA SEAGMGSRFT 
ISLPLTLAIL EGLTVAVGGE KFIIPINVVI ESLQPKPDQL KTVNGRQVVQ VRGEYLPIIR 
LHRIFNLESQ VVEPEHGILI MVEGDGERGA ILVDALLDEQ QVVVKSIETN YRRVEGSAGA 
TILGDGRVAL ILDLTELFLM HKKL