Gene Gbem_1042 details

Gene Information

• Locus tag: Gbem_1042
• ID: 6781020
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: -
• Start bp: 1214632
• End bp: 1215183
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 642767029
• Product: CheD, stimulates methylation of MCP proteins
• Protein accession: YP_002137859
• Protein GI: 197117432
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGCTAG CGGAGCGGCA ATCCGGCAGG GGTAGCTATT TCGAACCGGA ATTCGGCACG 
GTGGCCGTCA AGATCGTCGC CGGGGAATGC TTAGCCACGG CCGACCCCAT CGCCATCACC 
ACCGTGCTCG GCTCCTGCGT CTCGGTATGC CTCTACGACA TAGAGCTCGG GGTGGGAGGG 
ATGAACCACT TCATGCTCCC GGAACTTCTG CAGGGAAGAA GCGCCTCCCC TTGCTCCCGC 
GCCTGCAGCA GCAACTGCTG CGCGCGCTAC GGCAGCTGCG CCATGAGGCT GCTTTTGCAG 
CAACTGGAGC AGTTGGGGAG CAACCGGAGC CGGCTGGCCG CCAAGGTCTT CGGAGCCGGG 
CGCGTGATGG CTATGGCCAC GGACATAGGC GCCAGCAACG CCTCCTTCGC CCTGGAGTAC 
CTGAGGCAGG AGGGAATACC GGTAGTCGCG TCGGACCTGG GGGATTGCTG CCCCCGCAAA 
CTGGTGTTTT TCCCCCGGAC CGGAAAGGCC TGGGTGAAAA GGATGCGGGA TCTTCCCGCT 
GCAAGAGGAT AG 

 

Protein sequence

MLLAERQSGR GSYFEPEFGT VAVKIVAGEC LATADPIAIT TVLGSCVSVC LYDIELGVGG 
MNHFMLPELL QGRSASPCSR ACSSNCCARY GSCAMRLLLQ QLEQLGSNRS RLAAKVFGAG 
RVMAMATDIG ASNASFALEY LRQEGIPVVA SDLGDCCPRK LVFFPRTGKA WVKRMRDLPA 
ARG