| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1039 |
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| Symbol | |
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| ID | 6781017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 1209265 |
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| End bp | 1211661 |
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| Gene Length | 2397 bp |
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| Protein Length | 798 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642767026 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_002137856 |
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| Protein GI | 197117429 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGCC TTTCCATCGG ACAACTCAAG GCGCGCATTG GCATCACCGT CGGGATCATC
GTCGTCGCGG TATTGTGCAT CTCCGGCCTG GGGGACACCG CGAAGATGTC GGTAGCTGCG
GATGGCGGCG CGCAACTGCT GCTCGGCCAC CCGTTGCAGC ATTCGCTGCT GACGCTGGTT
TTGTGCCTGC TGATCCTGGC CCTCACCACC CTTTTGTTCC GGCACCTGGA CCGCTTGAAG
CAGGCGCAGC TCATGGTGGA GGGGCAGAAG GCGGAACTGG CGATAAAGGC CGCCCAGATC
GACGCCGCCA ACGACAGCAT CCTGCAGGTC GACGAGGAGG GGCGGCTGCT CCATTTCAAC
CAGGCGCTCT GCCGGCTCAC GGAGTACGAT TGCGAAGAAC TGGCGGGGAT GCGGCTGCAG
GAGATCGAAC CGCCGGAATA CGGCGGCCGG TTCGAGGCTA TCGTCAACGG GCTGAGGGAA
TCGAAAGAGG CGACCTTCGA AAGCGTCTAC CTCACCAAAG GTGGGGCTGC CGTTCCGGTC
GAGGTTCATT CCCGCCTGCT GGAGGGCGAG ATGAAGACCC AGATACTCGC CATCGCCCGG
GACATAACCG AGAGAAAGCG CAGCGAGCAA AGGGAGCGCT GCCGGCTGAA CACCCTGGAG
CGGATAGCGA CGGACGCCTC GCTCGACGAG CTTTTGGGGT GCGTGGTGAG GTACGTAGAG
CAGGAGATCC CGGGTGCGCT CTGCTCGGTC CTTTTGGTGG ACGAATCCGG CACCAGGCTG
CGCCACGGCG CCGCCCCATC GCTTCCCGAG GCCTACAACC AGGCGGTGCA CGGCCTGCGG
ATCGGCCAGG GGAAAGGGTC CTGCGGGACC GCCGCGTTCC TCAGGCAGCG GGTAGTGGTG
GAGGATCTGG AGTCGCACCC GTACTGGAAC GGGTTCCAGC CCGCCCGGGA TGCGGGGCTT
TCCGCCTGCT GGTCCGAGCC GGTCTTCGCC TCCAACGGCA TCCTGCTCGG AACCCTGGCG
GTCTATCACC GCGAGCCCCG CGCCCCCGGC AACGACGACC TGCGCCTCAT GGAGTCGGCG
GCCCACCTGG CCGGGATTGC CATAGGAAGG GTCAGGGCCG ACGACGGCAG GCGGGTTTTG
GAGGATCAAC TGCGCCACAG CCAGAAGATC GAGGCCGTGG GGCAACTGGC GGCGGGGGTG
GCACACGACT TCAACAACCT GCTGACGCCG ATCATAGTCT ACGCCGACAT GCTGCAGCAG
TACTGCCCCG CGGGAAGCAC CCAGGCGCGC ATGGTGGACG CCATGAGCCA GGCGGCCCAG
AAGGCGGGGG ATCTGACCCA GAAGCTCCTC TCCTTCGGGC GCAAACAGGC GCTCCACGTG
GAGCTATTGG ACCTGAACGA GGTGATTGCC TCCTTCAGGG ACATCCTGCG TGCCACCGCG
CGGGACAACG TCACCATCGA CCTGCGGCTT TCCCCGGGGG CCGCCAAGGT GCAGGCGGAC
CGGGGGCAAC TGGAGCAGGT GCTTTTGAAC CTCCTTTTGA ACGCCCAGGA CGCCATCGAC
GGGACCGGCT CGATCTGCGT CGAAACCGGG CACCTGATAC TGGACGATGA GTTCCACAGG
CAGCACCCGG TAGCGAAGCC CGGGCACTAC ATACTGCTTG CCTTTTCCGA CGACGGCTGC
GGCATGGCGG AGGAGACGCT CAGGCACATG TACGAGCCGT TCTTCACCAC CAAGGAGACC
GGGCGCGGCA CCGGCCTCGG GCTCGCCACT GTGTACGGCA TCGTCAAGCG CCATGGCGGC
TGCATCGACG TCAAGAGCCG CCCCGGAGAG GGGACCAGGT TCGGGATCTA TCTCCCCGCC
AGTTCCAGCA GCGCCGACCC CGTCACGGCC TCCCCCTCGC GCGCCGCGAT CCCGCCCGCC
GCGGGAAAGG GGAAGACCAT CCTCCTGGTC GAGGACAACG TCATGATCCG CGAGGTGGCA
GAGGAGCTTC TCTCCTCCTT CGGCTACGCG GTCCTGGCGG CCGAAAGCCC GGCCCGGGCG
CTGGAACTTG CCAAGGAGCA GCAGAGGATA GACCTTTTGG CGACCGACGT GGTCATGCCC
GAGATGACCG GACCGGAGCT CTACGAAAAA CTGCTTGAAA ATTACCCGGG GCTGCCGGTA
CTGTACATCT CCGGCTACAG CGCGGGGCTC CTGCCGCTTG ACGAGAGCCA GCGGCAGGAC
GCCATCTTCC TGGCCAAGCC CTTCACCCTG GAACAGTTCA TGGGCAAGAT CGGGGAGATG
CTCGGCTCGG ACCTCCTCCT GGCGGTGCAG GCGCCGCTGG ACGAGGCGAT GGCCAGGCTG
GTAACGAGAA GCTCGCGGCG AGTCAAGGAC CCAGCGGATA TATCCGCCAC AGCATAA
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| Protein sequence | MSRLSIGQLK ARIGITVGII VVAVLCISGL GDTAKMSVAA DGGAQLLLGH PLQHSLLTLV
LCLLILALTT LLFRHLDRLK QAQLMVEGQK AELAIKAAQI DAANDSILQV DEEGRLLHFN
QALCRLTEYD CEELAGMRLQ EIEPPEYGGR FEAIVNGLRE SKEATFESVY LTKGGAAVPV
EVHSRLLEGE MKTQILAIAR DITERKRSEQ RERCRLNTLE RIATDASLDE LLGCVVRYVE
QEIPGALCSV LLVDESGTRL RHGAAPSLPE AYNQAVHGLR IGQGKGSCGT AAFLRQRVVV
EDLESHPYWN GFQPARDAGL SACWSEPVFA SNGILLGTLA VYHREPRAPG NDDLRLMESA
AHLAGIAIGR VRADDGRRVL EDQLRHSQKI EAVGQLAAGV AHDFNNLLTP IIVYADMLQQ
YCPAGSTQAR MVDAMSQAAQ KAGDLTQKLL SFGRKQALHV ELLDLNEVIA SFRDILRATA
RDNVTIDLRL SPGAAKVQAD RGQLEQVLLN LLLNAQDAID GTGSICVETG HLILDDEFHR
QHPVAKPGHY ILLAFSDDGC GMAEETLRHM YEPFFTTKET GRGTGLGLAT VYGIVKRHGG
CIDVKSRPGE GTRFGIYLPA SSSSADPVTA SPSRAAIPPA AGKGKTILLV EDNVMIREVA
EELLSSFGYA VLAAESPARA LELAKEQQRI DLLATDVVMP EMTGPELYEK LLENYPGLPV
LYISGYSAGL LPLDESQRQD AIFLAKPFTL EQFMGKIGEM LGSDLLLAVQ APLDEAMARL
VTRSSRRVKD PADISATA
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