Gene Gbem_1020 details

Gene Information

• Locus tag: Gbem_1020
• ID: 6780998
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 1189470
• End bp: 1190150
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 642767007
• Product: ThiJ/PfpI domain protein
• Protein accession: YP_002137837
• Protein GI: 197117410
• COG category: [R] General function prediction only
• COG ID: [COG0693] Putative intracellular protease/amidase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.276045
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATAC TGATGGTACT GACCTCGCAT GACAAGCTCG GCAATACCGG TGAGCAGACA 
GGTTTCTGGC TCGAAGAGTT CGTCGCTCCT TACTATGTCT TTAGGGATGC TGGAGCCAGA 
TTGACCATTG CTTCGACAAA AGGAGGGAAG CCTCCCATCG ATCCTAAGAG TGATCTCCCA 
GAAAACCAGA CAGAGGGGAC CAGGCGCTTT GCCAAGGATC AGGCCGCTCA GGCTGAACTT 
GCCAACAGTA TCAGTCTTAG CGCCGTTTCC GCCGAAGAGT ACGACGCCGT ATTTTATCCC 
GGCGGGCACG GTCCCCTGTG GGATCTCGCC GTCAACCCCA CCTCGATCTC CTTGATCGAG 
AAATTTGCCA GATCCGGGAA ACCGGTGGCC GCGGTCTGCC ATGCCCCGGC TGTGCTGGCG 
GATGTAAGGG GTGGGGATGG CGAGTACCTG GTGAAGAACA AACGGGTGAC CGGGTTCACC 
AACTCCGAGG AACGGGCGGT CGGACTGACC GAGGTGGTCC CCTTTCTCCT GGAGGACCGG 
CTGAAGGATC GGGGGGCCCT CTTTGGCAGC GGCGCGGATT GGCAGCCGTA TGTGCAGGTG 
GACGGCAAGT TGGTCACCGG ACAGAATCCG GCATCGTCCG CGCCCGCAGC CCAGGCCCTG 
CTCCAACTGT TGCAGAGCTG A 

 

Protein sequence

MKILMVLTSH DKLGNTGEQT GFWLEEFVAP YYVFRDAGAR LTIASTKGGK PPIDPKSDLP 
ENQTEGTRRF AKDQAAQAEL ANSISLSAVS AEEYDAVFYP GGHGPLWDLA VNPTSISLIE 
KFARSGKPVA AVCHAPAVLA DVRGGDGEYL VKNKRVTGFT NSEERAVGLT EVVPFLLEDR 
LKDRGALFGS GADWQPYVQV DGKLVTGQNP ASSAPAAQAL LQLLQS