| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1017 |
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| Symbol | |
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| ID | 6780995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1181255 |
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| End bp | 1185226 |
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| Gene Length | 3972 bp |
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| Protein Length | 1323 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642767004 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_002137834 |
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| Protein GI | 197117407 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0591] Na+/proline symporter
[COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0385374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTACTC CCTTTAGCCT CATCGTCGTG TGCAGCCTCT ATATGGTCGC CTTGGTCGTT
GTCGCCCTCT GGGGCGAACG TAGGGCCGCC GCCGGCAAAG ACCTCTGCAA CAACCCCCTC
GTCTACGCGC TGTCACTGAC CGTGTTCCAC ACCGCCTGGA CTTTCTATGG CAGCGTCGGA
AAAGCTGCTT CCATGGGCAT GATCTTTCTC ACCGTATATG TCGGGGCCAC GCTTTCTGTC
ATGTTGTGGT GGCTGATCCT GCGGAAGATG GTGAGGATAA AGAATATCTA CCGGATCACC
AGCATCGCAG ATTTCATCTC TCTTCGTTAC AGCAAGTCAA CTGCTCTAGC TGCCTTGGTG
ACTATCATCT GCATCTTCGG AGCAGTCCCG TATTTCTCCC TTCAGCTCAA AGCTATACTG
GCGACCTTCG ACCTTATCAC CGGTTCCTCC GGCGCCTTCT GGAAGCACCT TAACATCGGG
CTCTTTATCT GCGCTTTCGT CATCTTGTTC ACCATACTGG TCGGCGTGAG AAAGCTTGTG
CCTACCGAAC GCCACCAGGG AATGGTGGTT GCGATGACTG CTGCAAGTAT AGTGAAGCTG
GTTCCGTTCC TCGCAGTCGG AGCCTACGTA ACCTACAGCA TGTACGGAGG CTTCGACGAT
GTATTCAGTC GTTTTGCTCA AATACCGGCC AGCACCACCC TTACCTCAAC ACAGTGTACT
CCCTCCTTTT ACGCCTCCTG GACTACTTAC ATGCTGCTTT CCACGTCGAG CGTGATGTTC
CTGCCGCGAC AATTTCACAT GGCGGTAGTT GAGAACGTCG ACGAGAAGCA CATCCTGACC
GCCATGTGGC TCTTCCCACT GTATATGCTG CTAATCAACC TCTTCGTCAT GCCGGTAACG
TTGGCCGGCC TTCTGGCTGG GTACCCGGCG CAGCAGGCAG ACAATTTCAT ACTCATGCTG
CCGCTTGCCA ATGGGCAAGG GGTGTTGTCG CTGCTTGTGT TCCTGGGCGG ATTCTCGGCA
GCGACCGGAT TGATCATCAT CGGATCTATG ACTATTGCTA CCATGGCCAC CAATCATCTG
CTGTTACCGG TCATCGAGTC GGTGACATTC TTGCGCGGTC TCAAGCAGTA TCTGCTTCAG
TGCCGTTGGC TCACCGTCGC CCTGCTGGTC TTCGCCGGAT ATTGGTTCCA GGGAGTGGTG
GGGGAATTCT TCATCTTGGT CGACATCGGC GTCCCTTCCT TTGCCGCTGT GCTGCAATTG
GCTCCTGCAA TAATCGGCGG GCTGTACTGG AGAAAAGGGA ACCTGGCCGG AGCATTTCTC
GGTATGGCAG CAGGTTTCCT GCTCTGGATG TACACATTGA TATTGCCGGC CTTGGTGCAA
GGCGGGTTGC TAAACCACGC CATATTGGGT GACGGCCTAT GGGGAATAGG ATGGCTCCGT
CCGGAGCATC TTTTCTATGT AACCGGGTTG GACGCGGCAA GCCATTCCGT ATTTTGGAGC
ATGTTCGTAA ACGTTACCCT GTACATCTTC GGATCGTTGT TCTTTGCACA GGACCTTCAG
GAGCGCAACA CAGCCGAGAA GTTTGTTGGT GCGCTAGACA TAGGCCCCAC GCCCGGACCT
TCAGGCATGG AGGCCGGAAT CGATCTGGCA GCCAAGATGA AGGAGATAGA AGAGCTTTAC
AGTCAATACT TTCCTCCGGA GAAATCATCC GCGATGGCCG GAGCGTGTCT TTCGACCTTG
AGGATGGAAC GAAAGAGCAG GATCTCCGTG GCCGAGCTGG CCGAATTGTA CAACGAGGCG
CAGATCATAC TGGCGAGTGC AATAGGCGCT GCGGCAGCAC ACAGGGCTTT CATAAAGAGC
CGTGTCATTT CCGAGCAAGA GCAAAGCACC TTGAAGCAGG TCTATGCCGA CATGATTGCC
GAGCTGAAAA TGGCCCCCTC CGATCTTAAG AGAAGGATCG ACTACCACCG GGAACGGGAG
CAACTGCTGA GCCTGCAAGC ACAAGAGCTG GAAGAGAAGG TAAGGGAGCG GGACCAGGAA
ATAATGCAGC GGCGGATTGC CGAACAGGCA CTCAGAGATT CGGAGCGGCG CTTGGCTGAC
ATAATCGATT TCCTTCCCGA TCCGACCTTT GTCGTCAATG CACAAGGAGC GGTCGTCATT
TGGAACCGCG CCGCAGAGGA GTTCACCGGT GCCAAGGCCG AAGCTATGCT GGGTAAAGCC
GGTAACGAGT GCGCCATCCC CTTCTATGGA ATGAGACGAC CGCTGCTACT CGACATGGTG
CTGGCCCCGT GGCGGGCTGA AGAGATCAAG CCGCTGTATG TGCGGCTCGT CGTCGAAGGG
GGCAAAATAA TCGGCGAGGG CCCGGTAAAA AGCGCCTCTC GCCCCCACGC TTATACCATG
GCAATGGCAG CACCTTTGTA TGACTCTGAG GGGGAGGTGA TTGCGGTGAT CGAATCGGTA
CGGGATATCA CCGAACTGAA GGAGGGAGAA GACGAGCTGA AGAGGCACCG CGCCCACCTA
GAGGAGTTGG TTCGTGAGCG GACAATGGAG CTGTTGGTAG CCAAGGAGCG GGCCGAGGTG
GCAAACCAGG CGAAAAGCGC CTTCCTCTCC AGCATGAGCC ACGAGCTGCG CACTCCCCTA
AACGCCATAC TGGGGTACGC CCAGATCCTG AAGCGGCAGG ACAACCTGAC GGATGCACAA
CGGCAACAGC TCGAAATCGT GCGCGGCTGC GGCGAGCATC TGCTTTCGCT CATAAACGAC
GTCCTGGATA TGGGTAAGAT CGAGGCCCAG AAAATGGAAC TTGCAGAACT CTCCTTTGAT
CTCTCCGCCC TACTGGGACA GGTGTTCAGC ATCGCCAAGG TGAAGGCGGA TGAGAAGGAT
CTGGGATTCA AGTACGAGGA ACTGAATCGT TTGCCGCGGG CCGTGCGGGG GGACCAGCGT
AAACTCAAGC AGATCTTGCT GAACCTGCTT TCCAACGCGG TGAAATACAC GCACCGCGGC
TGTGTAACTG TTCGTGTGCG TTACCACTCG AGCACCGGCG TATTCGCATG CGAGATAACG
GATACCGGCA CCGGGATCCC CAGGGACAAG CTCGGTATCA TTTTCGAGCC GTTCGTACAG
TTGGCGGATG GGGGACAGAT CCGGGAGGGA ACCGGCTTGG GGCTCTCGAT CACCCGGCGC
CTGGTGAGCC TGATGCATGG ACAGGTCACG GTGGAGAGCG AACCCGGTGC AGGAAGCACC
TTCAGGGTGG AACTGCCGCT GCCGACGGTG ACGGAAGGCG AGATCTCCCG AGCGGCGGCC
GGGCAGGCAA TCTCCGGCTA CCAGGGGGAG CGCAGGAGTA TCCTCATCGT CGATGACAAT
GTCACCAATG TCTCGATGCT GGTAGCCCTG CTGGAACCCT TGGGCTTTCA GATCAATACC
GCGGAGAACG GGCGGGAAGC ACTGAGTAAG GCAATGGAGC AAAAGCCCGA TCTCGTGCTG
CTGGACTTGG TCATGCCGGA GATGGACGGG CTGGATGCTG TCCGGGAAAT GAGGCGGCAC
CGGGAACTGG ACTTGACCAG GATCATCGGG ACCTCGGCGA CGGTGACCGA TAGCGTCCGC
AGGAACATGT TTTTGCGGCA GTGCGACGAC TTTATCGGCA AACCGGTTCC ACTTGAACTG
CTCCTGGACA GGATCGCTTT CCATTTGAAT GTGAGATGGG AGGTGGCTGC GGCCAAAATA
GCGGCGACAG AGCACGGCGA GAAACAGGAA CGGGAGGAAG CGGTCGAGGC TCCTCCTTTT
GCAGAGCTGA AGCAGCTTCA CAAACTGGCG TTGATGGGGG ACATGCAGGG AGTCCGATCC
TGGGCCGACC GTCTTGAGGA GCAGGAGCCA AAATACAGCC GTTTTGCCGA CATGTTGCGT
GGCCTTGCCG GCGAGTTCAG GGTAAAGGCC ATACTTGCGC TGGTGGAGCA GCAGATGAGA
GAGTCGTCGT GA
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| Protein sequence | MLTPFSLIVV CSLYMVALVV VALWGERRAA AGKDLCNNPL VYALSLTVFH TAWTFYGSVG
KAASMGMIFL TVYVGATLSV MLWWLILRKM VRIKNIYRIT SIADFISLRY SKSTALAALV
TIICIFGAVP YFSLQLKAIL ATFDLITGSS GAFWKHLNIG LFICAFVILF TILVGVRKLV
PTERHQGMVV AMTAASIVKL VPFLAVGAYV TYSMYGGFDD VFSRFAQIPA STTLTSTQCT
PSFYASWTTY MLLSTSSVMF LPRQFHMAVV ENVDEKHILT AMWLFPLYML LINLFVMPVT
LAGLLAGYPA QQADNFILML PLANGQGVLS LLVFLGGFSA ATGLIIIGSM TIATMATNHL
LLPVIESVTF LRGLKQYLLQ CRWLTVALLV FAGYWFQGVV GEFFILVDIG VPSFAAVLQL
APAIIGGLYW RKGNLAGAFL GMAAGFLLWM YTLILPALVQ GGLLNHAILG DGLWGIGWLR
PEHLFYVTGL DAASHSVFWS MFVNVTLYIF GSLFFAQDLQ ERNTAEKFVG ALDIGPTPGP
SGMEAGIDLA AKMKEIEELY SQYFPPEKSS AMAGACLSTL RMERKSRISV AELAELYNEA
QIILASAIGA AAAHRAFIKS RVISEQEQST LKQVYADMIA ELKMAPSDLK RRIDYHRERE
QLLSLQAQEL EEKVRERDQE IMQRRIAEQA LRDSERRLAD IIDFLPDPTF VVNAQGAVVI
WNRAAEEFTG AKAEAMLGKA GNECAIPFYG MRRPLLLDMV LAPWRAEEIK PLYVRLVVEG
GKIIGEGPVK SASRPHAYTM AMAAPLYDSE GEVIAVIESV RDITELKEGE DELKRHRAHL
EELVRERTME LLVAKERAEV ANQAKSAFLS SMSHELRTPL NAILGYAQIL KRQDNLTDAQ
RQQLEIVRGC GEHLLSLIND VLDMGKIEAQ KMELAELSFD LSALLGQVFS IAKVKADEKD
LGFKYEELNR LPRAVRGDQR KLKQILLNLL SNAVKYTHRG CVTVRVRYHS STGVFACEIT
DTGTGIPRDK LGIIFEPFVQ LADGGQIREG TGLGLSITRR LVSLMHGQVT VESEPGAGST
FRVELPLPTV TEGEISRAAA GQAISGYQGE RRSILIVDDN VTNVSMLVAL LEPLGFQINT
AENGREALSK AMEQKPDLVL LDLVMPEMDG LDAVREMRRH RELDLTRIIG TSATVTDSVR
RNMFLRQCDD FIGKPVPLEL LLDRIAFHLN VRWEVAAAKI AATEHGEKQE REEAVEAPPF
AELKQLHKLA LMGDMQGVRS WADRLEEQEP KYSRFADMLR GLAGEFRVKA ILALVEQQMR
ESS
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