| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0995 |
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| Symbol | |
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| ID | 6780968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 1151377 |
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| End bp | 1152285 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642766977 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_002137812 |
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| Protein GI | 197117385 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.388874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAACCT ACCAGATAGA CGCCAAAGAC CACTGCAGGC GCATGGACAG CTTCATGCGC
AACCTGCTGC CGACCGCCCA ATTTTCCTAC CTCAAAAAGC TGATCAGCTC CGGACACGTC
AAGGTGAACG GCTCCCCCGT CGAAGCGGCT CAGCTACTCA GGTTCGCCGA CCAGGTCACG
TTGAAGGAGA GCTCCAAGAC CGCGGCCTTC CTGGCGCGGC TCACCCCGGA GCTCGACATA
CTCTTCGAGG ACAGCTGGAT CATCTCGCTC AACAAGGCGC CGGGGCTGTC GGTGCACCGG
ACCGAGGACC CGGACGAGGT GAACTTGGTG GACCTCGCCG AGGCGCTGCT GCAAAAGCGC
GACGGCGTCG GCAGGCTCCG GCCGGTGAAC CGCTTGGACA AGGGGACTTC GGGAGCCATC
ATCCTCGCCA AGAGCGCTGT GGCCGCGGGG ATGTTCGGCA AGATGGTCCA GGAAGAGGGA
CTGGGCAAGC TCTACTTGGC GCTGGTGGAA GGAAAGCTCC AGAAGCAGGG TGTGATCGAT
GCGCCGTTGG ACGGAAAGGA ATCGCAGACA AGTTACCTGA GGCTCTTTCA TGGGGGCGGG
GTTTCGCTAT TGGCGGTCTA CCCGATCACG GGTCGCATGC ATCAGATCAG GCAGCATTTC
AAAATGATCG GTCACCCGAT CCTGGGGGAC AAACGCTACG GCGGGAGGGC TCTGACCGGC
TTCACCGGGC ACGCCCTGCA TTCCTTCAAG ACGACCCTGG TGCACCCGGC GACCCGCGAA
GAGGTCAACA TCCCGGCCCC GCTATCGGAG CAGTTGATGC GGCTCGTGTC GCGCTACAGC
GCCGTGAGCG AGAAGGACCT GCTCGACACC ATGCACCAGC TGCCGGCAGC AGGCCCCCTC
CCCGCCTAG
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| Protein sequence | MLTYQIDAKD HCRRMDSFMR NLLPTAQFSY LKKLISSGHV KVNGSPVEAA QLLRFADQVT
LKESSKTAAF LARLTPELDI LFEDSWIISL NKAPGLSVHR TEDPDEVNLV DLAEALLQKR
DGVGRLRPVN RLDKGTSGAI ILAKSAVAAG MFGKMVQEEG LGKLYLALVE GKLQKQGVID
APLDGKESQT SYLRLFHGGG VSLLAVYPIT GRMHQIRQHF KMIGHPILGD KRYGGRALTG
FTGHALHSFK TTLVHPATRE EVNIPAPLSE QLMRLVSRYS AVSEKDLLDT MHQLPAAGPL
PA
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