Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0978 |
Symbol | mutL |
ID | 6780951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 1135193 |
End bp | 1137136 |
Gene Length | 1944 bp |
Protein Length | 647 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642766960 |
Product | DNA mismatch repair protein |
Protein accession | YP_002137795 |
Protein GI | 197117368 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0323] DNA mismatch repair enzyme (predicted ATPase) |
TIGRFAM ID | [TIGR00585] DNA mismatch repair protein MutL |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0100042 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGCAACGA AGATTCGCAT ACTCCCTGAG AATTTAACCA ACAAGATCGC CGCTGGAGAG GTGGTGGAGC GTCCGGCCTC CGTCGCGAAG GAACTGGTGG AGAATGCACT CGACGCAGGT TCCAAGGAAG TCGTGGTCGA GATAGAGTCG GGTGGCAGGC GGCTCATCAA GGTCTCCGAT ACCGGTTGCG GCATGTCCCG GGACGACGCC TTGCTCGCCC TGGAACGTCA CGCAACCAGC AAGATCGCGA CAGACGAAGA TCTCTTCTCC CTCTGCACTC TCGGCTTCCG AGGCGAGGCG CTGCCATCTG TCGCCTCGGT TTCCCGCCTC ACCATCTCTA CCCGGACCAG CGACTCGGTC GAGGGGACGG AGATTTACGC CGAAGGGGGA CGGATCAAGG AAGTGAAGGA ATGCGGCATG GCGGTCGGGA CTGTGATCTC GGTGCGGAAT CTTTTCTTCA ACACGCCGGC GCGGCTTAAA TTCATGAAGA GCGCCGAGAC GGAGGGGGGG CACGTCGGGG AGTTGCTGAC CCGCCTCGCC ATCTCCAGGC CGGAGGTCCG CTTCACTTAT AAAAACGACG GCAAGGTGGT GTTCCGTGCG CTGGATGCGG ACCTGAAGGA GCGGGTCGCT ACTATGCTGG GGCGTTCCAT CGCCTCCTTT TTGTACCCCG TTTCCTACCA GGAGGGGGGG CTCAAGGTGA GCGGATTGGT TGCGGCGCCG GAGTGCAGCC GCAGTGCCGG GAGCCATCTC TACACCTACA TAAACGGACG TTTCATCAAG GACAAGGTGG TGCAGCACGC CATCCTCCAG GCGTACCGCA ACTTCCTGGA GCGCGGACGT TACCCTGTCG TCGCCGTTTT TATCGAGATA GCACCGGGCG AAGTCGATGT GAACGTGCAT CCGACCAAGC ATGAGGTTCG TTTCCGAGAG CAGGGGCGGG TGCACGACGC CATCCAGAAC GCGGTGGAGT CGGTGCTCAA GGAAACGCCG TGGCTAAAGC GCCCTGCAGT CGCAGCAGTA TCCCGGCCGA CGGAGAAGGA CGCGGCAGCG GCGCGAGCAG TCCTGGAGGG GTCGCAAGCT CCGCTGCCCG TGACGCCGCA GCCCCGGCCG GCGCTGACGT CTGAAAAACC GGTTCCCGCA CCGCAGGCTC AACCGCAGCA GTCGTCGATC AGCGAAGCGC GGGTGGCAGA GGTAAGGGAG CTCCTGGTGG ATTTTCAGCC GAGGCCGCAG CCTTCGCTTC GACCGCAGTA TCAGGGATCT GTGACGTCCA AGGAGGCGTT GCCCTATGCC CCCATGGCTG CGCCGGTGCC GGTCCGTGAA CCCGAGACGG CGGCGCCTGA ACCGGACCCC GCTGCAGCGG GATACTTCTC TTCGCTCGGC GTCATAGGGC AATTCAACGC CTCCTATATC CTCTGTCAAA GAGGGACCGA CCTCGTTCTC ATCGACCAGC ACGCAGCGCA CGAGCGGGTC GCGTTCGAAA AGCTGAAAGG GCAGTTCGCC GGGAGGGAGG TGGACAGCCA GGGGCTTCTC TTTCCGGAGA CCATGGAATT CTCCTTCCGC GAGTCGGCCG TATTGCGGGA ACACCTGGCG GAGCTTGCCC GCCTGGGGTT CGAGTTCGAA GAGTTCGGGG GGAATACCTG GCTGTTGAAG GGAGTCCCGC AGGTGCTGTC GGCGACGCGG TATGTGGACA CGATTCGCGA CATACTCGAG GAGCTGGGAA GCCTCAGCCG CAGCCGCGCC TTCAGCGATA TCCAGGAGGA CCTGCTCGCT CGCATCGCCT GCCACAGCGT GGTTCGTGGG AAGCGCACCC TGAGCCAAGT GGAGATAACG GCACTCTTCA AGCAGATGGA TGAGACCGAT TTCTCCAGTA ACTGCCCTCA CGGCAGGCCG GTGATGCAGA CCCTCACGCT CGCCGAAGTA GAGAAGATGT TCAAGAGAAT CTAG
|
Protein sequence | MATKIRILPE NLTNKIAAGE VVERPASVAK ELVENALDAG SKEVVVEIES GGRRLIKVSD TGCGMSRDDA LLALERHATS KIATDEDLFS LCTLGFRGEA LPSVASVSRL TISTRTSDSV EGTEIYAEGG RIKEVKECGM AVGTVISVRN LFFNTPARLK FMKSAETEGG HVGELLTRLA ISRPEVRFTY KNDGKVVFRA LDADLKERVA TMLGRSIASF LYPVSYQEGG LKVSGLVAAP ECSRSAGSHL YTYINGRFIK DKVVQHAILQ AYRNFLERGR YPVVAVFIEI APGEVDVNVH PTKHEVRFRE QGRVHDAIQN AVESVLKETP WLKRPAVAAV SRPTEKDAAA ARAVLEGSQA PLPVTPQPRP ALTSEKPVPA PQAQPQQSSI SEARVAEVRE LLVDFQPRPQ PSLRPQYQGS VTSKEALPYA PMAAPVPVRE PETAAPEPDP AAAGYFSSLG VIGQFNASYI LCQRGTDLVL IDQHAAHERV AFEKLKGQFA GREVDSQGLL FPETMEFSFR ESAVLREHLA ELARLGFEFE EFGGNTWLLK GVPQVLSATR YVDTIRDILE ELGSLSRSRA FSDIQEDLLA RIACHSVVRG KRTLSQVEIT ALFKQMDETD FSSNCPHGRP VMQTLTLAEV EKMFKRI
|
| |