| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0975 |
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| Symbol | |
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| ID | 6780948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1132216 |
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| End bp | 1133766 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642766957 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_002137792 |
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| Protein GI | 197117365 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCAGC GATTGCGCAT ACTGCATCTA GAGGACGATC CGATGGATGC CGAACTCGTC
TTGATGGCTC TTACCGCAGA GGGGCTCGAT TGTGAGGTCC AGGTGGTGTC GAGGCGGGAT
GAGTTCGACA AAGCTTTGCA GCGGGGTGGA ATGGACCTCA TTCTTGCCGA CTTTGCGCTC
CCTGCCTTTG ACGGGATGAG CGCCTTGGCG ATGGTCCGGG CCAAGCTTCC TGATCTGCCT
TTCGTCTTTG TCTCAGGCAA GCTTGGTGAA GAGGCGGCGA TTGAGTCCCT TAAAAGCGGC
GCCACCGACT ACGTGCTCAA AAGCAGGTTG TCCAGACTGG GGCCAGCGGT ACAAAGGGCG
CTAACTGAGG CAACGGAGCG CGCGAAGCAA CGCCAAACCG AGAAGGCGCT GGAGGTAGCA
TATGCTGAGA TAGAGAAGCG GGCGGAGGAC TACCGCAACC TCTTCAACAG CATCAGGGAC
GTCATCGTGG TGGCTGACCA CAACCGGACG ATCCTGCATG TCAATCAACC GGCACTCATT
GACACGTTTG GCTACAGCTC CGACGAGGTG GTGGGAGAAA GCAGCATCAT CCTCTACGCG
AATGAGGATG ACTTCCACAG CACCGGAAAA GAAGTATTCG ACGTGGAGGG ACCGGTGGAT
GGAAAACTCA TAGAGCTGAA CTTCCGCAGG AAAGGCGGGG AAGTTTTCAT CGGCGAACTT
TACGCGATGA AAAGGCTGGA CCGGCACGGC GTGGTGACCG GCAACATCTC GATCTTCAGG
GATATCAGCC AGCGCAAGAA AGCTGAGGCA GATCTCAGGG AGAGTGAACT GCGACGCTAC
CAACTGCAAT TGGAACTGGT TTACGCCGCG GAAATCCAGG CAAAACTATT GCCGCGCAGT
TATCCAAATA TCCCCGGTTT TGATGTAAGC GCGAGGTGTC TGCCTGCGAA GCAGGTGGGA
GGGGATTTCT ACGATTGGCA GCAGGTGACC CCCACCGTTT TCAATCTGAC TCTTGGTGAT
GTGATGGGCA AGGGGATGGC GGCGGCCATG CTCATGGCGA CCGTTAGAGC GGCACTTCAT
GCCGTTACGC TGTACAACAC ACCCGCGCCG GCGGTGCACC TGGCGGAAAA GGCGCTCAAC
GAGGATCTGG AGAATTCCGA GAGCTTTGTC ACCCTTTTCC ATGCCCAGCT CGACTCCGTT
ACACGCACCC TTTCCTTCGT CGATTGCGGT CATGGCTATG TCTTTGTCAG GAGAGCCACT
GGCGCGGTGG AGACTCTCTC GCCGAGAGGG CTTCCCCTGG GGGTGCAGGG GGGGGAAGTT
TACCAGGAAG GGAAGGTACA GTTTGAAAAG GGGGATGTGT TTGTTCTTTA CAGCGATGGG
CTCATCGACG CCAACCCGCA GCTCGAGTTG ACCCATGAGA TACTTGCCGG GCAGATTAGA
AGTGAGGAGG GCGCGCTGGA GACTGTGGAT CGGCTCATTG CTCTCACTAG GCAGCCTGAC
CCGCAGCCTG ACGACATAAC CGTACTGGTG GCAAAATTTA ACGGCGACTA A
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| Protein sequence | MTQRLRILHL EDDPMDAELV LMALTAEGLD CEVQVVSRRD EFDKALQRGG MDLILADFAL
PAFDGMSALA MVRAKLPDLP FVFVSGKLGE EAAIESLKSG ATDYVLKSRL SRLGPAVQRA
LTEATERAKQ RQTEKALEVA YAEIEKRAED YRNLFNSIRD VIVVADHNRT ILHVNQPALI
DTFGYSSDEV VGESSIILYA NEDDFHSTGK EVFDVEGPVD GKLIELNFRR KGGEVFIGEL
YAMKRLDRHG VVTGNISIFR DISQRKKAEA DLRESELRRY QLQLELVYAA EIQAKLLPRS
YPNIPGFDVS ARCLPAKQVG GDFYDWQQVT PTVFNLTLGD VMGKGMAAAM LMATVRAALH
AVTLYNTPAP AVHLAEKALN EDLENSESFV TLFHAQLDSV TRTLSFVDCG HGYVFVRRAT
GAVETLSPRG LPLGVQGGEV YQEGKVQFEK GDVFVLYSDG LIDANPQLEL THEILAGQIR
SEEGALETVD RLIALTRQPD PQPDDITVLV AKFNGD
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