Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0948 |
Symbol | rplF |
ID | 6783790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 1104643 |
End bp | 1105182 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642766925 |
Product | 50S ribosomal protein L6 |
Protein accession | YP_002137765 |
Protein GI | 197117338 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00150811 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAGAA TAGGAAAACT TCCCATCGCG ATTCCTGCGG GGGTGAAAGT CATATACAAC GCCCCGGAGA TCAAGGTGGA GGGCCCGAAA GGGAAACTCG CCCGCAACAT CGGGGAAGGC GTCGCCATCG ACGTGACCGC GCAGGCGGTA ACGGTGACCA GGCACGACGA CACCATCAAG TCCCGCTCGG CCCATGGCCT GACTAGGACC CTGATCAACA ACATGGTGAT CGGCGTCTCT AAAGGGTTCG AGACCCTGCT CGAGATCAAC GGCGTCGGTT ACCGCGCCGA GGTGAAGGGC AACGTGCTGA ACCTGGCCCT GGGCTTTTCG CACCCGGTCA ACTTCGAGCT GCCGACCGGC ATCACGGTCG AGGTCGAGAA GATGACCAAG CTCAAAGTGA TGGGGATCGA CAAGGAAGTG GTCGGCGAGA CCGCCGCCAA GATCCGCGCG TTCCGTCCGC CCGAGCCGTA CAAGGGTAAG GGTGTCAAGT ACGCTGACGA AACGATTCTG AGAAAAGCCG GCAAGACCGG TAAAAAATAG
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Protein sequence | MSRIGKLPIA IPAGVKVIYN APEIKVEGPK GKLARNIGEG VAIDVTAQAV TVTRHDDTIK SRSAHGLTRT LINNMVIGVS KGFETLLEIN GVGYRAEVKG NVLNLALGFS HPVNFELPTG ITVEVEKMTK LKVMGIDKEV VGETAAKIRA FRPPEPYKGK GVKYADETIL RKAGKTGKK
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