| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0945 |
|---|
| Symbol | rplE |
|---|
| ID | 6783787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 1103440 |
|---|
| End bp | 1103979 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642766922 |
|---|
| Product | 50S ribosomal protein L5 |
|---|
| Protein accession | YP_002137762 |
|---|
| Protein GI | 197117335 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0094] Ribosomal protein L5 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0195859 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGGC TAGCTGAGCT TTACAATAAA GAGATGGTTC CGGCCCTCAT GAAGGACCAG
AACTACAAGA ACATCATGGA AGTCCCCAAG CTGGTGAAGA TCGTGGTCAA CATGGGCCTC
GGCGAAGCGA TCCAGAACGT CAAGATCCTG GATTCCGCAG CCGAAGAGCT CGCCGCCATC
ACCGGGCAGC GCCCGGTCAT CACCAAGGCG AAGAAGTCCA TCGCGGGCTT CAAGCTGCGC
CAGGGGATGC CTATCGGCTG CGCCGTGACG TTGCGCCGCG AGAAGATGTA CGAGTTCCTC
GACCGCCTGG TAAGCGTCTC GCTGCCGCGC GTGCGCGACT TCAAGGGGAT CTCCGGCAAG
GCCTTCGACG GCAAGGGTAA CTACTCCCTG GGCGTCAAGG AGCAGTTGAT CTTCCCCGAG
ATCGATTACG ACAAGGTCGA CAAGATCAAG GGTCTCAATA TCACGATCGT GACCACGGCA
AAGACCGACG CTGAGGGGAA AGCCCTGCTC AAGCTGATGG GTCTGCCGTT CAGGAACTAA
|
|---|
| Protein sequence | MARLAELYNK EMVPALMKDQ NYKNIMEVPK LVKIVVNMGL GEAIQNVKIL DSAAEELAAI
TGQRPVITKA KKSIAGFKLR QGMPIGCAVT LRREKMYEFL DRLVSVSLPR VRDFKGISGK
AFDGKGNYSL GVKEQLIFPE IDYDKVDKIK GLNITIVTTA KTDAEGKALL KLMGLPFRN
|
|---|
| |