Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0933 |
Symbol | rplC |
ID | 6783775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 1098071 |
End bp | 1098706 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642766910 |
Product | 50S ribosomal protein L3 |
Protein accession | YP_002137750 |
Protein GI | 197117323 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00137042 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAAGG GATTGATTGG GAAAAAGCTG GGGATGACCC AGATATTCGC CGAAGACGGC AGGCGCATCG CTGTGACCGT CGTCGAGGCT GGGCCGTGCG TCGTCGTCCA GAAGAAGAGC GTGGCAAAGG ACGGCTACTC CGCCATACAG GTCGGTTTCG GAGCGAAGGA CGCCTCCAGG GCGAACGCAG CACAGGTCGG GCACTGCAAA GGCGCCGGCG CCGGCGTGTT CACCCACTAC CGCGAACTGC GCATGGACAA CACGGACGCC TACAAATTGG GCGACGTGAT CGAGGCTGCG GTTTTCGAGG AAGGCGACCT GGTCGACGTG ACCGGCACCT CCATCGGTAA GGGCTTTGCC GGCGTCATCA AGCGCTGGGG CTTCAAAGGC GGGCGGTCGA GCCACGGCTC CCGTTTCCAC CGCGCCCCGG GTTCCATCGG CTGCTCCGCG ACCCCCTCCA GGGTTTTCAA GAACAAGAAG ATGCCGGGCC AGCTCGGTAA CGAGAAGGTG ACCGTGCAGC GCCTCAAGGT GGTTCGCGTT GACGCTGCTG ACAATCTGAT TCTGCTCGGT GGAGCGATCC CCGGTTCCGC CAACGGCGTC GTCCTGATCA AGGACTCCGT CAAGGCGAAG AAATAA
|
Protein sequence | MNKGLIGKKL GMTQIFAEDG RRIAVTVVEA GPCVVVQKKS VAKDGYSAIQ VGFGAKDASR ANAAQVGHCK GAGAGVFTHY RELRMDNTDA YKLGDVIEAA VFEEGDLVDV TGTSIGKGFA GVIKRWGFKG GRSSHGSRFH RAPGSIGCSA TPSRVFKNKK MPGQLGNEKV TVQRLKVVRV DAADNLILLG GAIPGSANGV VLIKDSVKAK K
|
| |