| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0927 |
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| Symbol | |
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| ID | 6783769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1089105 |
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| End bp | 1093253 |
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| Gene Length | 4149 bp |
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| Protein Length | 1382 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642766904 |
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| Product | DNA-directed RNA polymerase, beta' subunit |
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| Protein accession | YP_002137744 |
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| Protein GI | 197117317 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.828749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAAGACA TTTTTAACTT TTTCGATAAG CCGAAGGACC CGCTCCACTT CTCTTCCATC
AAGATCTCGA TCTCCTCGCC GGACAAGATC CGCGAGCGTT CCTTCGGGGA AGTGAAGAAA
CCGGAAACCA TAAACTACCG TACCTTCAAG CCGGAGCGCG ATGGCCTCTT CTGCGCCAAG
ATCTTCGGAC CGACCAAGGA TTACGAGTGC AACTGCGGCA AGTACAAGCG CATGAAGCAC
CGCGGCATCG TCTGCGAGAA GTGCGGCGTC GAGGTCATCC CCTCCAAGGT GCGCCGCGAG
CGCCTGGGGC ACATCGACCT GGCCACCCCG GTGGCGCACA TCTGGTTCCT GAAGTCGCTC
CCGTCCAGGA TCGGCAACCT GATGGACATC ACGCTTAAGG ACCTCGAGAA GGTGCTCTAC
TTCGAGGCCT ACGTGGTAAC CGATCCGAAG GACACCGGCC TTGCCTTCGG TACCGTCTTC
TCTGAGGACC AGTACCAGAA GGCCCTCGAG GAATACAGCT ACGGCTTCGA GGCCGGCATG
GGCGCCGCTG CGATTCGCAC CTGCCTCACC TCGATGGACC TGGACCAACT CTCCGAGCAG
CTCCGTATCG AGATGCAGGA GGCGACCTCC GAGGCCAAGC GCAAGAAGAC CGCCAAGCGC
CTGAAGGTTA TCGAGGCCTT CAAAAACTCC GGCAATAAGC CCGAGTGGAT GATCCTCGAG
TGCATCCCGG TCCTGCCGCC TGAGCTCCGT CCGCTGGTCC CTCTCGACGG CGGCCGCTTC
GCTACGAGCG ACCTGAACGA CCTGTACCGT CGCGTCATCA ACCGCAACAA CCGCTTGAAG
CGCCTGATGG AACTGCAGGC CCCCGAGGTC ATCATCAGGA ACGAGAAGCG CATGCTGCAG
GAGGCGGTCG ACGCGCTGTT CGACAACGGC CGCCGCGGCC GCGCCATCGC AGGCCCGAAC
AAGCGTCCGC TTAAGTCCCT CTCCGACATG CTCAAAGGGA AATCCGGCCG TTTCCGCCAG
AACCTCCTCG GTAAGCGTGT CGACTACTCC GGCCGTTCCG TTATCGTCGT CGGTCCGGAG
CTTCGCCTGC ACCAGTGCGG TCTGCCGAAG AAGATGGCCC TCGAGCTCTT CAAGCCGTTC
ATCTACAACA AGCTCGAGGA GCGCGGTTTC GTCACCACCA TCAAGAGCGC CAAGAAGATG
GTGGAGAAGG AGAAGCCGGA AGTCTGGGAC GTGCTCGAGG AGGTTATCAA GGAGCACCCG
GTTCTGCTGA ACCGCGCCCC GACCCTGCAC CGCTTGGGCA TCCAGGCTTT TGAACCGGTG
CTCATCGAAG GAAAGGCGAT CCAGCTCCAC CCGCTGGTCT GCACCGCCTT CAACGCCGAC
TTCGACGGCG ACCAGATGGC CGTCCACCTC CCCCTCTCGG TTGAGAGCCA GGTGGAGGCG
CGCGTCCTCA TGATGTCGAC CAACAACATC CTGTCGCCGG CGCACGGCAA GCCGATCATC
GTGCCGTCGC AGGACATGGT TCTCGGGATC TACTACATGA CCCGCGATAA GCACTTCGCG
CTGGGGGAAG GGAAGATCTT CGCCTCCCCG GACGAGGTCA ACATCGCCTG GGACGCGGGT
GAGATCCACC TGCAGGCGCG TATCAAGGTC AGGATGAAGA ACCTCGTCTC GGACGAGAAG
CCGACCCTGA TCGAGACCAC CACCGGCCGC GTGCTTTTGC GCGACATCCT GCCGGATGCC
GTGCCGTATG CAACCATCAA CAAGGTCATG ACCAAGAAGG AGCTCTCCAA CCTGGTCGAC
GTCTGCTACC GTCTGGCCGG GAACAAGGAG ACGGTCATCC TCGCCGACAA GCTGAAGGCG
ATCGGTTTCC GCTACGCGGC GAAAGCCGGC ATCTCCATCT CGATCAACGA CATGGTCATC
CCGGAAGGAA AGCCCGCCAT CATCAACCGC GCCACCGAAG AGGTGCAGGA GATCCAGAAC
CAGTACACCG AGGGTCTCAT CACCGACGGC GAGCGCTACA ACAAGGTCAT CGACATCTGG
GCGAAATCCA CCGAGGACAT CGCCAAGGAG ATGCTGGACA ACCTCTCCCG CGACACCATC
CTGGACCCGG AAGGGAAGGA AGTGAAGGTT CCCTCCTTCA ACGCGATCCA CATGATGGCC
GACTCGGGCG CAAGGGGTAG CGCGCAGCAG ATCCGCCAGC TGGCAGGGAT GAGGGGACTC
ATGGCCAAAC CTTCGGGCGA GATCATCGAG ACCCCGATCA CGGCGAACTT TCGCGAAGGC
CTCACCGTGC TCCAGTACTT CATCTCCACC CACGGCGCAC GTAAGGGTCT GGCCGATACC
GCGCTCAAGA CGGCGAACTC CGGTTACCTT ACCCGCCGTC TGGTCGACGT CGCGCAGGAC
GCCATCATCA CCGAGGCCGA CTGCGGCACC ATCGACGGGC TCACCGTCTC CTCCCTCACC
GAGGGTGGCG AGGTGATCGA GCACATCGGC GACCGTATCC TCGGGCGCGT GGCTCTCGAC
GACATCCTCG ACCCGGTCAC CGGCGACGTG CTGGTCCCGG CCAACGAGGA GATCGACGAG
ACGCTGGTGG CGAAGATCGA AGCCGCCGGC CTCGAGAAGG TCAAGATCCG CTCGGTGCTC
ACCTGCGAGA GCCGCCGCGG CATCTGCGCC AAGTGCTACG GCCGCGACCT GGCACGCGGG
CACCTGGTGA ACCGCGGCGA GGCGGTCGGC GTCATCGCCG CCCAGTCCAT CGGCGAGCCG
GGCACCCAGC TCACCATGCG TACCTTCCAC ATCGGTGGTA CCGCTTCGAG GCGCGCCGAG
CAGACCGCGT TGGAGGCGAG GAACGAGGGT TTCGCCAAGT TCATCAACAT CAACTACGTC
ACCAACTCGG AAGGGCACCA CATCGTCATG AACCGCAACG GCGAGCTCGC CATCGTGGAC
GAGACCGGGC GCGAGCGCGA GAAGTACGGC GTCGTCTACG GTGCGAAGAT CAAGGTGAGC
CCGCAAGAGA AGGTCGCCCA GGGGCAGTCG GTCGCCGAGT GGGACCCGTA CACCATGCCG
ATCCTCACCG AGGTCGCCGG CCGGGTCAAG TTCGGGGACG TCATCGAGGG CGTCACCATG
GAGGAGCAGG TCGACGAAGT CACCGGTCTC TCCAGGAAGG TCATCATCGA GACCCGCGAC
ACCGACAAGC GTCCGCGCAT CACCATCAAG GACGAGAGCG GCAAGACCGC CAAGATCGGC
GAGAACCTTC TGGCCCGCTA CTACCTCCCG GTCGGCTCCA ACATCAACGT GCTGGAAGAA
ATCGAGGTGA ACGCAGGCGA CGTAATCGCC AAGATCCCGC GCGAAACCAC CAAGACCAAG
GACATCACCG GTGGTCTGCC GCGTGTTGCC GAGCTCTTCG AAGCGAGGAA ACCGAAGGAC
TTCGCGGTCA TCACCGAGAT CGACGGCGTG GTCGCCTTCG GCAAGGACGC CAAGGGTAAG
CGCAAGGTAC TGGTCACTCC GGAACTCGGC GAGCCCAAGG AATACCTGAT CCCCAAGGGG
AAGCACATCA GCGTCCACGA AGGGGACCAT GTCCGCGCCG GCGAGGCGCT CATGGACGGC
TCCTCCAACC CGCACGACAT CCTGCGCGTC CTCGGCCAGA AAGAACTGGC CAAGTACCTG
GTCGACGAGG TCCAGGAGGT GTATCGACTC CAGGGCGTCA AGATCAACGA CAAGCACATC
GAGACCATCG TACGTCAGAT GCTGCGCCGC GTCAGGGTCA AGGATGTCGG CGATACCAAT
CTGCTCATCG ACGATCAGAT CGAGCGCTGG GTCTTTGAGG AAGAAAACGA AAAGGCGATG
GACAAAGGCG GGCGTCCTGC AACTGCTGAG TCATTGCTCC TTGGCATAAC CAAGGCGTCG
CTCTCTACCG AGTCATTTAT TTCTGCTGCT TCCTTCCAGG AGACAACAAA AGTATTGACA
CAAGCATCGA TTGAAGGTAA GGTCGATAGT CTTCGCGGTC TCAAAGAGAA CGTGATTATG
GGCCGCTTGA TCCCGGCGGG AACGGGATTG GCTCTTTACC GCAACCTACG CATGGTTGCT
GAGGAGCCAG TAATCATTCC GGAGCCAGCA GAACCGGAAG ATGAAGAAAT CTACGAAGAA
GAAGCCTAG
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| Protein sequence | MEDIFNFFDK PKDPLHFSSI KISISSPDKI RERSFGEVKK PETINYRTFK PERDGLFCAK
IFGPTKDYEC NCGKYKRMKH RGIVCEKCGV EVIPSKVRRE RLGHIDLATP VAHIWFLKSL
PSRIGNLMDI TLKDLEKVLY FEAYVVTDPK DTGLAFGTVF SEDQYQKALE EYSYGFEAGM
GAAAIRTCLT SMDLDQLSEQ LRIEMQEATS EAKRKKTAKR LKVIEAFKNS GNKPEWMILE
CIPVLPPELR PLVPLDGGRF ATSDLNDLYR RVINRNNRLK RLMELQAPEV IIRNEKRMLQ
EAVDALFDNG RRGRAIAGPN KRPLKSLSDM LKGKSGRFRQ NLLGKRVDYS GRSVIVVGPE
LRLHQCGLPK KMALELFKPF IYNKLEERGF VTTIKSAKKM VEKEKPEVWD VLEEVIKEHP
VLLNRAPTLH RLGIQAFEPV LIEGKAIQLH PLVCTAFNAD FDGDQMAVHL PLSVESQVEA
RVLMMSTNNI LSPAHGKPII VPSQDMVLGI YYMTRDKHFA LGEGKIFASP DEVNIAWDAG
EIHLQARIKV RMKNLVSDEK PTLIETTTGR VLLRDILPDA VPYATINKVM TKKELSNLVD
VCYRLAGNKE TVILADKLKA IGFRYAAKAG ISISINDMVI PEGKPAIINR ATEEVQEIQN
QYTEGLITDG ERYNKVIDIW AKSTEDIAKE MLDNLSRDTI LDPEGKEVKV PSFNAIHMMA
DSGARGSAQQ IRQLAGMRGL MAKPSGEIIE TPITANFREG LTVLQYFIST HGARKGLADT
ALKTANSGYL TRRLVDVAQD AIITEADCGT IDGLTVSSLT EGGEVIEHIG DRILGRVALD
DILDPVTGDV LVPANEEIDE TLVAKIEAAG LEKVKIRSVL TCESRRGICA KCYGRDLARG
HLVNRGEAVG VIAAQSIGEP GTQLTMRTFH IGGTASRRAE QTALEARNEG FAKFININYV
TNSEGHHIVM NRNGELAIVD ETGREREKYG VVYGAKIKVS PQEKVAQGQS VAEWDPYTMP
ILTEVAGRVK FGDVIEGVTM EEQVDEVTGL SRKVIIETRD TDKRPRITIK DESGKTAKIG
ENLLARYYLP VGSNINVLEE IEVNAGDVIA KIPRETTKTK DITGGLPRVA ELFEARKPKD
FAVITEIDGV VAFGKDAKGK RKVLVTPELG EPKEYLIPKG KHISVHEGDH VRAGEALMDG
SSNPHDILRV LGQKELAKYL VDEVQEVYRL QGVKINDKHI ETIVRQMLRR VRVKDVGDTN
LLIDDQIERW VFEEENEKAM DKGGRPATAE SLLLGITKAS LSTESFISAA SFQETTKVLT
QASIEGKVDS LRGLKENVIM GRLIPAGTGL ALYRNLRMVA EEPVIIPEPA EPEDEEIYEE
EA
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