Gene Gbem_0909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0909 
Symbol 
ID6783746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp1071083 
End bp1072180 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content63% 
IMG OID642766881 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_002137726 
Protein GI197117299 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01745] aspartate-semialdehyde dehydrogenase, gamma-proteobacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00126121 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTCG GACTGGTCGG TTGGCGTGGC ATGGTAGGCT CCGTTCTTCT CCAGCGTATG 
CAGGAGGAAA ACGATTTCCA GGGAATAGAG CCGGTTTTCT TTACAACCTC GCAGGTGGGG
CAGCCCGCCC CGATGAACGC CGGGACGCTC AAGGACGCCT CTGACATAAA CGAGCTGAAG
AAGCTGGACG TGATCATCAC CTGCCAGGGT GGCGACTACA CCAAGGCGGT GCGCCCGGAA
CTGAACAAGG CGGGATGGAA AGGGTACTGG ATCGATGCGG CCAGCACGCT CCGCATGGAG
AAGGACGCCG TCATCATCCT CGACCCGATC AACCGCAACG TCATCGACGC TGCCCTTGCC
AAAGGGGTCA AGGACTACAT CGGCGGCAAC TGCACCGTGA GCCTCATGCT CATGGGCCTG
GGCGGGCTCT TCAAGGCGGG TGCTGTCGAG TGGATCACCT CCATGACCTA CCAGGCAGCC
TCCGGCGCGG GCGCTCCCAA CATGCGCGAA CTCCTCTCCC AGATGGGCGT ATTGCAGGGC
TCGGTAGCCG ATCTCTTGGC CACCCCGGGC TCCGCCATCC TGGAGATCGA CCGCAAGGTG
ACCCAGACCC TGAGGGGGGG CGATCTCCCC ACCAAGGAGT TCGGCTTTCC GCTCGCGGGT
AGCGTCCTTC CCTGGATCGA CCGCGAGGTC GAGGACGGGC AGAGCCGCGA GGAATGGAAA
GGGTATGCCG AGACCAACAA GATCCTCGGC ACCGCGAACC CGATCCCGGT CGACGGCATC
TGCGTCCGCG TGGGGGCCAT GCGCTGCCAC AGCCAGGCGC TGACCATCAA GCTGAACAAG
GACATCCCCA TCGGCGAGAT CGAGGAGATG ATCAAGAACG ACAATCAGTG GGTCAAGTTC
GTTCCCAACA CCAAGGCGGA GACTTTGGCT CAGTGCACCC CGGCAGCCGT TTCCGGTTCG
CTCACCGTGC CGGTCGGCCG CGTGAGGAAG ATGAAGATGG GGCCGCAGTA CCTCTCCGCC
TTCACCTGCG GCGATCAGCT CCTTTGGGGT GCCGCCGAGC CGCTGCGCCG CATGCTGCAG
ATCCTGAAGG AGCGGTAA
 
Protein sequence
MKVGLVGWRG MVGSVLLQRM QEENDFQGIE PVFFTTSQVG QPAPMNAGTL KDASDINELK 
KLDVIITCQG GDYTKAVRPE LNKAGWKGYW IDAASTLRME KDAVIILDPI NRNVIDAALA
KGVKDYIGGN CTVSLMLMGL GGLFKAGAVE WITSMTYQAA SGAGAPNMRE LLSQMGVLQG
SVADLLATPG SAILEIDRKV TQTLRGGDLP TKEFGFPLAG SVLPWIDREV EDGQSREEWK
GYAETNKILG TANPIPVDGI CVRVGAMRCH SQALTIKLNK DIPIGEIEEM IKNDNQWVKF
VPNTKAETLA QCTPAAVSGS LTVPVGRVRK MKMGPQYLSA FTCGDQLLWG AAEPLRRMLQ
ILKER