Gene Gbem_0908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0908 
Symbol 
ID6783745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand+ 
Start bp1069867 
End bp1070955 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content63% 
IMG OID642766880 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_002137725 
Protein GI197117298 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0378851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAAGC TTTTTAAAGT GGCGGTATTG CCAGGAGACG GCATAGGTCC CGAGGTTATG 
GCTGAAGCAC TGAGGGTGCT CGATGCAGTC GAGAAACGTT ACGATGTCAC TTTCGAGCGG 
ACCCACGCCA ACGTAGGCGG GGCGGGAATC GACCAGGAAG GTCGTGCGCT TCCCGAGACC 
ACCGTAAACA TATGCAAGGC TTCGGACGCC ATCCTTTTCG GCTCCGTCGG CGGACCCAAG 
TGGGAAACAC TTCCCCCGGA CGAGCAGCCC GAGCGCGGCG CCCTGCTGCC GCTTCGGAAG 
ATCTTCGGCC TTTACGCCAA CCTGCGTCCG GCCATCATCT TCCCGTCGCT CACCAGCGCC 
TCCTCGCTGA AGGAAGAGGT CATCGCAGGA GGCTTCGACA TCCTGGTGAT CCGCGAGCTG 
ACCGGCGGCA TCTACTTCTC CCAGCCCAAA GGGATCGAAG GCGAGGGGCG TAACCGCGTC 
GGCGTCGACA CCATGCGCTA CAGCGTCCCG GAGATCGAGC GCATCGCGCA CGTAGCATTC 
CAGGCGGCGA GAAAGCGCGG CAAGAAGGTC TGCTCCATCG ACAAGGCCAA CGTCCTTTCC 
AGCTCCGTCC TCTGGCGCGA GATCGTGATC AACATCGCCA AGGAATACCC GGATGTCGAG 
CTCTCCCACA TGTACGTCGA CAACGCCGCG ATGCAGCTCG TGAAGTGGCC CAAGCAGTTC 
GACGTGATCC TTTGCGAGAA CATGTTCGGC GACATCCTCT CCGACGAGGC GGCCATGCTG 
ACCGGCTCTC TGGGGATGCT TCCCTCCGCC TCCCTGGCCG AGGGGACCTT CGGCATGTAC 
GAGCCTTCCG GCGGGAGCGC CCCGGACATC GCAGGCCAGG GGATCGCCAA CCCGATCGCC 
CAGATCCTCT CGGCGGGGAT GATGCTCCGT TACTCCTTCG GCATGATCGA GGCGGCCGAC 
GCCATCGACA AGGCGGTCGC CAAGGTGCTG GACGGCGGGT ACCGCACCAG GGACATCTAT 
CAGGAGAAGG CAGGCGAGAA GCTGGTGAAC ACCAAGGAGA TCGGCGACGC CATCATCGCC 
AACCTCTAA
 
Protein sequence
MGKLFKVAVL PGDGIGPEVM AEALRVLDAV EKRYDVTFER THANVGGAGI DQEGRALPET 
TVNICKASDA ILFGSVGGPK WETLPPDEQP ERGALLPLRK IFGLYANLRP AIIFPSLTSA 
SSLKEEVIAG GFDILVIREL TGGIYFSQPK GIEGEGRNRV GVDTMRYSVP EIERIAHVAF 
QAARKRGKKV CSIDKANVLS SSVLWREIVI NIAKEYPDVE LSHMYVDNAA MQLVKWPKQF 
DVILCENMFG DILSDEAAML TGSLGMLPSA SLAEGTFGMY EPSGGSAPDI AGQGIANPIA 
QILSAGMMLR YSFGMIEAAD AIDKAVAKVL DGGYRTRDIY QEKAGEKLVN TKEIGDAIIA 
NL