| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0904 |
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| Symbol | |
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| ID | 6783741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1062758 |
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| End bp | 1064545 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642766876 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_002137721 |
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| Protein GI | 197117294 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACAGGA AGAAGATGTT CACCATTAAG AATGTGGGAC AGATACTCCT GCAGCGCCAG
ATGATCAGCG AGGAGCAGTT CCAGGTGCTG CTCGCCCAAG GTGAGGCGCA GGCCCAGCGG
CTGGCCGGCG CGCAGCAGGC CGGCTATTCT CGCCGGGTGC TGCATGCGCC GGAAAAGGCC
TCTCCTGCCG AGGTGATCGC CTCCTTCAAC CTGGAGATTC CGGGAGCGGG GGGGAGGCTT
CTGACCGAGG ACGCCATCAC GGAGGTGCTG GCACAGGCTG TCGGGCTTCC TTATCTCAAG
ATCAACCCGA TGAAGCTCAA TCTCGATCTG GTCACGGCGC ACATCTCCCG CCCCTTCGCC
TTGAAGCACC TCATCGTCCC GGTGGGATAC GAGGAGGGGG TGGTGGTGCT GGCGGTAGCC
GACCCCTTCA ACGAGGAGGT CGTCGAGGAG CTCAGATCCA TCAAGCGGAT GGAGTTCCGC
CGCGTCTTAG CCTCCAGAAA CGACATCCTC AAGATACTCA GGGAGTTCTT CGGCTTCCGC
GCCTCGGTGC AGGCCGCCGA GAGCGAGGTA ACGGCGGGGG TGGACCTCGG CAACCTCGAG
CAGTTCGTGC GCATGAAGAC CGGGCACGAG ATCGAGGGAA CGGACCGCAA CATCATCTCC
GCCGTGGATT TCCTCTTGCA GTACGCCTTC GACCAGCGCG CCAGCGACAT CCACATCGAG
CCCAAGAGGG AGAAATCCCT GGTGCGGCTC AGGGTGGACG GCGTGCTGCA CAACGTCCAC
GTGGTACCCA AGCAGCTGCA CCCCCCCATC GTCTCCCGCA TCAAGATGCT CTCCCGCATG
GACCTCGCCG AAAAGAGGCG TCCCCAGGAC GGCCGGATCA AGACCAACCA CCAGGAAAAG
GAGGTTGAGC TGCGCGTCTC CACGCTCCCT GTCGCCTTCG GCGAGAAGGT GGTGATCAGG
ATCTTCGATC CCGACGTGCT GATGCAGGAG CTCGACCAGA TAGGCTTCTA TCCGCGGGAG
TACCAGCTCT ACAGCTCGTT TTTGCGCAGG CCCAACGGCA TCATCCTCGT CACCGGACCT
ACCGGCAGCG GCAAGACCAC GACGCTCTAC TCGTCCCTGC GCACCCTCTC CTCGCCCGAG
GTCAACATCG TCACCGTGGA GGACCCCATC GAGATGGTGA TGGAGGAGTT CAACCAGGTG
GGGGTCCAGT CCGGGATCGG GGTGACCTTC GACAAGGTGT TGAGAAACGT GCTGAGGCAG
GACCCGGACA TCATCATGAT CGGGGAGATC CGGGACAAGG AGACGGCCGA GAACGCGGTG
CAGGCGGCGC TCACCGGGCA CCTGGTGCTA TCCACCCTGC ACACGAACGA CGCTCCCTCT
TCGGTGACGA GGCTCATCGA CCTGGGCGTC CCCCCCTTTC TCATCTCTTC CACCGTGGTC
GGGATCATCG CGCAGAGGCT GCTGCGCAAG ATATGTCCGG CTTGCAAGAA GGAGCGCCGG
CTTGCCCCCG ACGAGCTCGA ATACCTGGGG CTCAAGCGCG CCGGAACCGT CTGGTTCGGC
GAGGGGTGCG CAGAGTGCCG CGGCACCGGC TACAAGGGGA GGACCGGGAT CTTCGAGGTG
CTGGACGTGA ACGAAGCGGT GAAGGGGGTT ATTTCGGAGC GGCTCGACCT GGCCGAGTTG
CAGGCGGTCG CCCGCCGCGA CGGCCTGGTC ACGCTCAGGG AGCAGGCCAT CCGCAAGATG
CTGGAGGGGA TCTCCACTTA CGAAGAGGTG ATTGCAGTCA CGGGGTAG
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| Protein sequence | MHRKKMFTIK NVGQILLQRQ MISEEQFQVL LAQGEAQAQR LAGAQQAGYS RRVLHAPEKA
SPAEVIASFN LEIPGAGGRL LTEDAITEVL AQAVGLPYLK INPMKLNLDL VTAHISRPFA
LKHLIVPVGY EEGVVVLAVA DPFNEEVVEE LRSIKRMEFR RVLASRNDIL KILREFFGFR
ASVQAAESEV TAGVDLGNLE QFVRMKTGHE IEGTDRNIIS AVDFLLQYAF DQRASDIHIE
PKREKSLVRL RVDGVLHNVH VVPKQLHPPI VSRIKMLSRM DLAEKRRPQD GRIKTNHQEK
EVELRVSTLP VAFGEKVVIR IFDPDVLMQE LDQIGFYPRE YQLYSSFLRR PNGIILVTGP
TGSGKTTTLY SSLRTLSSPE VNIVTVEDPI EMVMEEFNQV GVQSGIGVTF DKVLRNVLRQ
DPDIIMIGEI RDKETAENAV QAALTGHLVL STLHTNDAPS SVTRLIDLGV PPFLISSTVV
GIIAQRLLRK ICPACKKERR LAPDELEYLG LKRAGTVWFG EGCAECRGTG YKGRTGIFEV
LDVNEAVKGV ISERLDLAEL QAVARRDGLV TLREQAIRKM LEGISTYEEV IAVTG
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