Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0900 |
Symbol | |
ID | 6783737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 1057075 |
End bp | 1059345 |
Gene Length | 2271 bp |
Protein Length | 756 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642766872 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_002137717 |
Protein GI | 197117290 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.361287 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGATTT CAGCCGAAAA AGGGGGAACG CCCCCGCAAT ACCAGGGGCC GGAACTTTCC GCCGGTGAAG TAAGGAAAAG AAAGCGCGAG GCCATAATCG TCTGCCTCTC GCTGTTAACC ATCTGCCTCC TCACCTACCT GGAGATCCAC CTCTCCCGCC TAAGCGAGCA GGTGCCGATG GGCAGCAACA TCGCCATCTT CGGCATGGTA AACCTGATCA TCCTCCTCAT CATCCTGCTG GTCTACCTGG TCTTCAGAAA CATAGCCAAA CTGGTCCTGG AGCGGCGCAA GAACACGCCG GGGGCGAAGC TGCGCACGAA GCTGGTGCTT GCCTTCGTCA CCCTCTCGCT GGTCCCGACC ATGCTGCTGT TCTTCGTCTC CGCCGGCTTC ATCAAGAACA GCATCTCGAA CTGGTTCAAC AAGCAGGTGG AGACCTCGCT CAACGAGTCG ATGGAGGTGG CCCAGGTCTA TTACCAGACC TCCGCGGCCA ACGCCCTCTA CTACGGCGAG CAGATCAGCA CCGCCATCAA GGAACGTAAG CTTCTGAACG AGGAGAACCT CCCCAAGCTG AAGGCCCTGG TGCGCCAGAA ACAGACCGAA TATAACCTGG GGGTGGTCGA GGTCTTCTCG GCGCAGCGCG AGGAGCTGTT CCGGGCGGGC AATGCCAAGC TGCCGCTGGG TGAATTCACC AACCCCTCGT CAGAGGATAT CCAACGCGTC CTCTCCGGGG CCAGGCTTAC CCGCGTCAAC GCCATCGGCA AGGCCGACCT GATCCGCGGC ATAGTCCCCA TCCACAGCAA CTTCAACGAG AACGACGTGG TCGGGGTGGT GGTGGTCAAC TACTACGTTC CCTACTCGCT GGTGTCCAAG ATGCGGGAGA TCTCCTCCTC CTACCAGGAG TTCCGCCAGC TGAAGATCCT GAAAAACCCG ATCAGGACCG GATACATACT CACCCTGTTC CTGATCACCA TGGTGATCCT ATTCCTGGCC GTGTGGTTCG GGATGTACCT CGCCCGAAGC CTCACCATCC CGATTCAGGA ACTGGCGGAG GCGACCCGGC AGGTGGCCGA GGGGAACCTG GACGTACACC TGGGCCAAAG CGGGGGGGAC GAGATAGGGA TGCTGATCTC CTCCTTCAAC CGGATGACCG AGGACCTCCG GGCGAACCAG CTCGCGCTGC AGCACACCAA CGAGGAACTG CAAAAGAGCA ACCTCGAGTT GGAGCAGCGC CGCCGCTACA TGGAGGCGGT GCTCGCCAAC GTCACCGCCG GCATCATCTC GGTGGACAAG AACGGCCTGC TCACCACGGT GAACAAATCG GCCGAAAAGC TGCTCCTCAT CGACACGGAC AGGGTCACCG GGCAGAACTT CCGCGAGGTG CTGCGCCCGG AGCACCTGGA CATCGTCAAG GGGCTCCTGC GGGACATGGT GCTTGCCAAG CACGACTCCA TCGTGCGGCA GGTGGTGATC CCGATGCGCG ACGCGGAGCT CACCCTGCTC ACCAACCTCA CCGTCCTGAA GGACGAAAAT GACGCCTTCA TGGGAATGGT GGTGGTGCTG GACGACATGA CCTCGCTGAT CAAGGCGCAG CGCATGGCCG CCTGGCGCGA AGTGGCCCGA AGGATCGCCC ACGAGATCAA GAACCCGCTC ACCCCGATCC AGCTCTCCGC CCAGCGGCTG AGGAAGCGCT ACCTCACCCG GTTCGAGGGG GAGGAGGAGG TGTTCGACCA GTGCACCGCC ATGATCATCA AGTCCGTGGA CGAGCTGAAG GGGCTGGTGA ACGAGTTCTC CAACTTCGCC CGGATGCCGG CCGCGGTGCT GAAGCCAAAC GACCTGAACG GGATACTCAA GGAGGCGCTC ACCCTCTACG ACGAGGCGCA CCGGCACATA CGCTTCGTGC TGAACGCCGA CGAGGCAATC CCCCCTATCC TTTTGGACCG CGACCAGATC AAGCGGGTAG TGATCAACCT CTTGGACAAC GCCGTCGCCG CCATAGAGGG GGAGGGGGAG GGAGTGGTCG AGCTCAGCAC CAGCTACGAC AGCCAGTTGA AGATGGTCAC TTTCACCGTT TCCGACACCG GTCACGGCAT ATCCGCCGAA GACCGCCCGC GGCTCTTCGA GCCGTACTTC TCCCGCAAGA AGAGCGGCAC GGGGCTCGGG CTTGCCATCG TCAACACCAT CATCACCGAC CACCACGGCT TCATCAGAGC CAAGGAAAAC TACCCCAAGG GGAGCAGGTT CGTCATCGAG CTCCCCGCTG ACGCGGCATA A
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Protein sequence | MPISAEKGGT PPQYQGPELS AGEVRKRKRE AIIVCLSLLT ICLLTYLEIH LSRLSEQVPM GSNIAIFGMV NLIILLIILL VYLVFRNIAK LVLERRKNTP GAKLRTKLVL AFVTLSLVPT MLLFFVSAGF IKNSISNWFN KQVETSLNES MEVAQVYYQT SAANALYYGE QISTAIKERK LLNEENLPKL KALVRQKQTE YNLGVVEVFS AQREELFRAG NAKLPLGEFT NPSSEDIQRV LSGARLTRVN AIGKADLIRG IVPIHSNFNE NDVVGVVVVN YYVPYSLVSK MREISSSYQE FRQLKILKNP IRTGYILTLF LITMVILFLA VWFGMYLARS LTIPIQELAE ATRQVAEGNL DVHLGQSGGD EIGMLISSFN RMTEDLRANQ LALQHTNEEL QKSNLELEQR RRYMEAVLAN VTAGIISVDK NGLLTTVNKS AEKLLLIDTD RVTGQNFREV LRPEHLDIVK GLLRDMVLAK HDSIVRQVVI PMRDAELTLL TNLTVLKDEN DAFMGMVVVL DDMTSLIKAQ RMAAWREVAR RIAHEIKNPL TPIQLSAQRL RKRYLTRFEG EEEVFDQCTA MIIKSVDELK GLVNEFSNFA RMPAAVLKPN DLNGILKEAL TLYDEAHRHI RFVLNADEAI PPILLDRDQI KRVVINLLDN AVAAIEGEGE GVVELSTSYD SQLKMVTFTV SDTGHGISAE DRPRLFEPYF SRKKSGTGLG LAIVNTIITD HHGFIRAKEN YPKGSRFVIE LPADAA
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