Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0896 |
Symbol | |
ID | 6783733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 1050389 |
End bp | 1051417 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642766868 |
Product | NLP/P60 protein |
Protein accession | YP_002137713 |
Protein GI | 197117286 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000013444 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAAAT GCGTCAAGCT AATAGCCTTA TGCCTTCTCA TGCTCTCCGT CCCTTCGCTC GCCTTCGCTG CCAAGACCCA TCGCGTTAAA AAGCACGAAA CCCTATATTC CCTCGCCAAA AAGTATCATG TCACCGTTGA AGAACTGAAG GCTGCGAACA ACCTGGTCGG CAACAGCGTG AAGCCGCGCG TCGTCCTGGT TATCCCCGCC CGCTCCGTTT CCGAGGGAAG AAACGAGACG GCGTCGAGCG ACGCGACTTA CAAGGTGAAG AAAAGCGAAA GCCTCTCCCG CATCTCGAAG AAGACCGGCG TGTCCGTGGC GGAGCTGAAG CGCCTGAACG GACTCAGCAG CAGCCGGGTC AAGGCCGGGA AGGTGCTGGT TCTCAAGGAG AGCGCTCCCG CCGACGAGCC GAAGGTCAAG GTGGTCAAAA AGCTGCAGCT GCGCCATGGC GACCTTTTCA ACGAGAAAGA TTACGAGCAG AGCCTTCAGG AGTTGACCGC GCTCGAGCCT GAGCAGCAGG TGGATCTGGC CAAGAACGCC GAGCTCAAGG TGGACAACCT CAAGGAACTG AAGAAATCCG CCTACGGCTT CCTCGGGACC CGCTACCGCT TCGGCGGGAG TTCCCGCTCC GGCATCGACT GTTCCAGTTT CGTGCAGCAC GTGTTCCGCG ACCTCGAGGT CTCCCTGCCG CGCACCGCTC GCGAGCAGTT CGAGGTGGGG AATGCAGTGG CGCCGGGCGA CCTGCAGAAG GGGGACCTGA TCTTCTTCGC CACCTACGCC TCCTATCCGT CCCACGTAGG GATCTATCTG GGCAACAACA AGATGATCCA TGCCTCCTCC CGCGACCGCA GGGTGGTCAT CTCCTCGCTC AACACCTCCT ACTACCGTTC CCGCTTTCTG GGGGCCAAAA GGATCGCCAA GGTGAATCCG GAAGTGTTCC AACTGGACGA CCTGATCCTG GGGGTCGAGG AGGAGAGCCC GGAGGAGATG CTGGAAAACG ACTCGCTCGG GTTGACGAGC AGCAACTAG
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Protein sequence | MIKCVKLIAL CLLMLSVPSL AFAAKTHRVK KHETLYSLAK KYHVTVEELK AANNLVGNSV KPRVVLVIPA RSVSEGRNET ASSDATYKVK KSESLSRISK KTGVSVAELK RLNGLSSSRV KAGKVLVLKE SAPADEPKVK VVKKLQLRHG DLFNEKDYEQ SLQELTALEP EQQVDLAKNA ELKVDNLKEL KKSAYGFLGT RYRFGGSSRS GIDCSSFVQH VFRDLEVSLP RTAREQFEVG NAVAPGDLQK GDLIFFATYA SYPSHVGIYL GNNKMIHASS RDRRVVISSL NTSYYRSRFL GAKRIAKVNP EVFQLDDLIL GVEEESPEEM LENDSLGLTS SN
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