| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0889 |
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| Symbol | |
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| ID | 6783726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 1041097 |
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| End bp | 1042722 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642766861 |
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| Product | hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit |
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| Protein accession | YP_002137706 |
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| Protein GI | 197117279 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000151157 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACTC CAGAGTTCAA GTACCAGGAA GCCTTCCCGC TCGGACCGGA CAGCACCAAG
TACCGCCTGA TCCCGGATTC CAAGCAGTAC GTGTCGGTGT CCAACTTCGA GGGGCAGGAG
ATCCTCAAGG TGGCGCCCGA GGCGCTTACC ATCGCGGCCA ACGCCGCCAT GAAGGACCTC
TCCTTCATGC TGCGCCCGGA GCACAATGAG CAGGTAGCCA AGATCCTCGC CGACCCGGAA
GCCTCCCAAA ACGACAAGGG TGTCGCCCTC GCCTTCCTGA GAAACGCAGA GGTCGCAGCG
CAGCTCGAAC TCCCCATCTG CCAGGACACC GGCACCGCCA TCGTCATGGG CAAGAAAGGG
CAGCAGGTCT GGACCGGCGC CAACGACGAG GAGTACCTCT CCAAGGGGGT CTACAAGACC
TACACCGAGG AGAACCTGCG CTACTCCCAG ACCGTGGCTC TGGACATGTA CAAGGAGATC
AACACCGGCA CCAACCTCCC GGCCCAGATC GACGTCTACG CGACCAAAGG GGCCGAGTAC
AAGTTCCTTT TCATGGCCAA GGGGGGCGGC TCCGCCAACA AGACCTATCT CTACCAGGAG
ACCAAGGCGC TCCTTAACCC GGACAGCCTG ATCAAGTTTC TGGTCGCCAA GATGAAGACC
CTCGGGACCG CGGCCTGCCC GCCGTACCAC TTGGCCTTCG CCATCGGCGG CACCTCCGCC
GAGGCGTGCC TGAAGACCGT GAAGCTCGCC AGCGCCAAAT ACCTGGACGC CCTCCCCACC
TCCGGCAACG ACGGTGGCCA GGCGTTCCGC GACGTCGAGC TCGAGCAGCA GCTCCTCAAG
GCGGCCCAGG AATCCGGCAT CGGCGCGCAG TTCGGCGGCA AGTACTTCGC CCACGACGTG
CGCATCGTCC GCCTGCCCCG CCACGGCGCC TCCTGCCCGG TCGGCATGGG GGTCTCCTGC
TCCGCTGACC GCAACATCAA GGCGAAGATC AACAAGGAAG GGATCTGGGT CGAGCAGATG
GACGACAACC CGGGCCGCCT GATCCCCGAG CGTTTCCGCG GCAAGCACGA GCACGGCGTC
AGGATCAACC TGAACCAGCC GCTCAAGGAC GTCCTTGCCG AGTTGACCAA GCACCCGGTC
TCCACGCCGC TGCTCCTCTC CGGAACCATC GTGGTCGGCC GCGACATCGC CCACGCCAAG
TTCAAGGAGA TACTCGACTC CGGCAAGCCG CTTCCCGAGT ACCTGAAGAA CCACCCGATC
TACTACGCGG GCCCGGCGAA GACCCCGAAA GGGAAGCCCT CCGGCTCCTT CGGCCCCACC
ACCGCCGGTC GCATGGACTC CTACGTCGAC CTCCTGCAGG CAAACGGCGG CTCCATGATC
ATGATCGCCA AGGGCAACCG CTCCCAGCAG GTCACCGACG CCTGTAAGAA GCACGGCGGC
TTCTACCTGG GCTCCATCGG CGGCCCGGCT GCCATCCTGG CCGAGGAGAA CATCAAGAAG
GTCGAGTGCA TCGACTTCCC CGAGCTCGGC ATGGAGGCGG TTTGGAAGAT AGAGGTTGAG
GACTTCCCGG CGTTCATCCT GGTGGACGAC AAGGGGAACG ACTTCTTCAA GCAGCTGGGC
ATCTAG
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| Protein sequence | MATPEFKYQE AFPLGPDSTK YRLIPDSKQY VSVSNFEGQE ILKVAPEALT IAANAAMKDL
SFMLRPEHNE QVAKILADPE ASQNDKGVAL AFLRNAEVAA QLELPICQDT GTAIVMGKKG
QQVWTGANDE EYLSKGVYKT YTEENLRYSQ TVALDMYKEI NTGTNLPAQI DVYATKGAEY
KFLFMAKGGG SANKTYLYQE TKALLNPDSL IKFLVAKMKT LGTAACPPYH LAFAIGGTSA
EACLKTVKLA SAKYLDALPT SGNDGGQAFR DVELEQQLLK AAQESGIGAQ FGGKYFAHDV
RIVRLPRHGA SCPVGMGVSC SADRNIKAKI NKEGIWVEQM DDNPGRLIPE RFRGKHEHGV
RINLNQPLKD VLAELTKHPV STPLLLSGTI VVGRDIAHAK FKEILDSGKP LPEYLKNHPI
YYAGPAKTPK GKPSGSFGPT TAGRMDSYVD LLQANGGSMI MIAKGNRSQQ VTDACKKHGG
FYLGSIGGPA AILAEENIKK VECIDFPELG MEAVWKIEVE DFPAFILVDD KGNDFFKQLG
I
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