Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0878 |
Symbol | |
ID | 6783715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 1031721 |
End bp | 1033142 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642766850 |
Product | hopanoid biosynthesis associated radical SAM protein HpnJ |
Protein accession | YP_002137695 |
Protein GI | 197117268 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | [TIGR03471] hopanoid biosynthesis associated radical SAM protein HpnJ |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.858521 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCCGC TATTTCTGAA CCCGCCGACC TTCGAGGACT TCGACGGGGG GGCCGGTGCG CGCTACCAAG CCTCCCGCGA GGTTACCTCC TTCTGGTTTC CCGGCTGGCT TACCTATCCC GCAGGGATGA TCCCCGGAGC CCGGGTCGTG GATGCCCCGG TGCAGCGGCT CGATCTCGAT GCCTGCCTGA AGATCGCCAA AGAGTTCGAC ATGGTGGTGA TGTACACCTC CACCCCGACG CTCGCCATCG ACGTAGAAAC CGCCCGCCGC GTCAAGGCCC AGAACCCCGC CACCGTCACG GTGCTGACCG GCCCCCACGT GAGCGTCCTC CCCGAGGAAT CGCTTCGCTT CGCCGCCGGC GCCGTCGACA TAGTCTGCCG CGGCGAGTTC GACTACTCCA CCAAGGAGCT TTGCGAAGGG AAGCCGCGTG CGGAGGTGGA GGGCATCAGC TTTCTGCAGG ACGGGAAGGT GGTGCACACC AAGGACCGCC CCCCCATCGC CGACCTCGAC AGCCTCCCCT TTGCAAGCCA GGTCTACCAT CGCGACCTTC CCATCGATGA GTACGTCATC CCGCATTTCC GGCACCCTTA CGTCTCCATC TACGCCTCCC GCGGCTGCCC CTCGCGCTGC ATCTACTGCC TGTGGCCCCA GACCTTCTCC GGGCGGACCC TGAGGAAGAG GAGCCCGCAG AACGTGTATG AAGAGGTGCG CTGGATCAAG GAGAACCTCC CCCAGGTGAA GGAGATCTCC TTCGACGACG ACACCTTCAC CGCCGACCGC GAGCACGCCA AGGCGATTGC CCGGGCCATC AAGCCGCTCA ACGTCTCCTG GGTGATCAAC GCGCGGGCCA ACTGCGACTA CGAGACGCTC AAGGAGTTGC GCGACGCCGG GATGCACCAC GTGGTGGTCG GCTACGAGAC GGGGAACGAG CAGATCCTGA AGAACATCAA GAAAGGGGTC ACCAAGGCGC AGGCCATCGA GTTCACCCGC AACTGCCACA AGCTCGGCCT CACCATACAT GGCGCTTTCG TGCTGGGGCT CCCCGGGGAG ACCAGGGAGA CCATCAAGGA GACCATCGCC TACGCCATAG ATCTCAACCT CACCTCGATC CAGGTCTCGC TCGCCTCCCC CTATCCCGGC ACCGAGTTCT ACGATATGGC GCTCAAGGAG GGGTGGATCG CCTCGGACAG CTTCCTGGAT GCCAGCGGGC ACCAGAAATG CGTCATCAAC TATCCCGACC TCTCCAATAA GGAGATCTTC GACGCGGTCG AACTCTTCTA CAACAAGTTC TATTTCCGCC CCCGTTACAT CGCGCGCAGC CTCTTCAGCA TGCTGGTCGA CTCCGCCCAG CGCAAGAAGC TTCTCAAGGA GGGGGCGCAG TACCTAAGCT ACATGAGAAA GCGCAAGCAG ACCTGCGCCT AG
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Protein sequence | MKPLFLNPPT FEDFDGGAGA RYQASREVTS FWFPGWLTYP AGMIPGARVV DAPVQRLDLD ACLKIAKEFD MVVMYTSTPT LAIDVETARR VKAQNPATVT VLTGPHVSVL PEESLRFAAG AVDIVCRGEF DYSTKELCEG KPRAEVEGIS FLQDGKVVHT KDRPPIADLD SLPFASQVYH RDLPIDEYVI PHFRHPYVSI YASRGCPSRC IYCLWPQTFS GRTLRKRSPQ NVYEEVRWIK ENLPQVKEIS FDDDTFTADR EHAKAIARAI KPLNVSWVIN ARANCDYETL KELRDAGMHH VVVGYETGNE QILKNIKKGV TKAQAIEFTR NCHKLGLTIH GAFVLGLPGE TRETIKETIA YAIDLNLTSI QVSLASPYPG TEFYDMALKE GWIASDSFLD ASGHQKCVIN YPDLSNKEIF DAVELFYNKF YFRPRYIARS LFSMLVDSAQ RKKLLKEGAQ YLSYMRKRKQ TCA
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