| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0877 |
|---|
| Symbol | |
|---|
| ID | 6783714 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 1030802 |
|---|
| End bp | 1031569 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642766849 |
|---|
| Product | purine or other phosphorylase family 1 |
|---|
| Protein accession | YP_002137694 |
|---|
| Protein GI | 197117267 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0775] Nucleoside phosphorylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.729819 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACAG AGTGCCTCGG GGCGGTGGCC GCCATGCCCC AGGAGATAGC CCCGCTTTTG
CGACGGGTGC GGCGGTTCCA GAAGGAAAAG ATCTCCGGGT TCAACCTGTA CCGCTTCGAC
TGCGGCAGTA CCCGCGTCGC CCTGATCGAA TCCGGGATGG GGCCCGACCA CGCGGCTCTT
GCCACGGCAA CCCTGATCCG GAGCGCCTCG CCGCATGTGA TCCTCAACTT CGGGTTCTGC
GGCGGCGTGC TCCCCGGCCT AACCGTAGGC GACCTGGTGC TGGCCGAGCG GGTCTTCGCG
CTTGCCGGGG GGAGACTGAG CGAGGTGCTC ACACCTCCTC TGCCGCTGAC CTCCCCGATC
CTGGAAAGCT GCCGCAAACA CGGGCTCTCT TCCCGGCCCG GCTCCTTCAT CACCGCCACC
GGTGTGGTGA ACAAGCGCGC GCTCGCGCAG ACGCTGGAGG GATCGATTCA CGAACCGGTG
CTGGAAATGG AGAGTGCTGC GGTGTTCCGG GAGGCCGAAA AAGCCGGAAT CGAAGCAGTG
GCGCTCAGAG GGGTGAGCGA CCCGGCAGAG GAAGAACTTG GCTTCGACAT CGCCGAGATC
TGCGACTCGG AGCTGAACCT GAGCCCGTGG CGGCTCGTGC TCACCCTGGC CAAGAGACCT
TCGCTGGTAC CGCAGTTCAT CCGGCTGGCG CGGAACTCCA AGGTAGCGGG GGCAAACCTG
GCGCTCGGGG TGGAGCTGGC GCTTTTGGTG CTTAGCGAAA CGCAGTAA
|
|---|
| Protein sequence | MKTECLGAVA AMPQEIAPLL RRVRRFQKEK ISGFNLYRFD CGSTRVALIE SGMGPDHAAL
ATATLIRSAS PHVILNFGFC GGVLPGLTVG DLVLAERVFA LAGGRLSEVL TPPLPLTSPI
LESCRKHGLS SRPGSFITAT GVVNKRALAQ TLEGSIHEPV LEMESAAVFR EAEKAGIEAV
ALRGVSDPAE EELGFDIAEI CDSELNLSPW RLVLTLAKRP SLVPQFIRLA RNSKVAGANL
ALGVELALLV LSETQ
|
|---|
| |