Gene Gbem_0870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0870 
Symbol 
ID6783708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp1025869 
End bp1026417 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content57% 
IMG OID642766844 
Productsigma 54 modulation protein/ribosomal protein S30EA 
Protein accessionYP_002137689 
Protein GI197117262 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1544] Ribosome-associated protein Y (PSrp-1) 
TIGRFAM ID[TIGR00741] ribosomal subunit interface protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACAA CCGTGACGTT CAGACACATG GAGCCGAGCG ACGCTCTCAA GAGCTACGCA 
GAAGAGAAAC TGGAGCGGGT TAAGAAATAT ATAGACGAGC CGATCGTCGT CCAGGTATTT
TTGACCGTTG AGAAGATCCG TCACATGGCC GAGGTAACCA TCACCGCCAA GGGGATCACC
ATCAAGGCCG CAGAAGAAAC CAACGACATG TACGCCTCCA TCGACGCAGT TTCGGACAAG
ATCGAGCGCC AGCTGCGCCG CTTCAAGGAG CGCATCAAGG CCCACAAGCC CGCCCCCGAC
GCCCGCGAGC GCCAGGTGCA AAAGAGCATC GTCGAGGCCC AGAGCATCGA AGAAGGGGCA
CAGGCCCCGG TCATCATCAA GACCAAGAGC TTCTCCATGA AGCCCATGTC CGTCGAGGAA
GCCGTGATGC AGATGGAACT TTTGCACAAG GACTTCCTGG TCTACACCGA GTCCTCCACC
GAGAAGATCA ACGTCGTGTA CCGCAGGAAA GACGGCAACT ACGGCCTGAT CTCCCCGGAG
ATCGCCTGA
 
Protein sequence
MQTTVTFRHM EPSDALKSYA EEKLERVKKY IDEPIVVQVF LTVEKIRHMA EVTITAKGIT 
IKAAEETNDM YASIDAVSDK IERQLRRFKE RIKAHKPAPD ARERQVQKSI VEAQSIEEGA
QAPVIIKTKS FSMKPMSVEE AVMQMELLHK DFLVYTESST EKINVVYRRK DGNYGLISPE
IA