Gene Gbem_0861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0861 
Symbol 
ID6783699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp1016924 
End bp1017934 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content61% 
IMG OID642766835 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_002137680 
Protein GI197117253 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAGA TACTTGTTAC CGGCGCAGCG GGTTTCATAG GCTCGCACCT TTCCCACAGG 
CTCCTCGCCA AGGGGCACGA GGTGGTTGGG CTCGATAACC TGAACGACTA TTACGATGTC
AGCCTGAAAG AGGGGAGGCT GGCGAGGCTG GAAGGGAAGC CGGGCTTTCG CTTAGTGCGG
ATGAACCTTG AGGACCGGGA GGGGATAGCC CGCCTCTTTG CCGCAGAGAA GTTCGATTCC
GTGGTGAACC TGGCCGCCCA GGCCGGGGTC CGCTACTCGA TCCAGAACCC CTACGCCTAC
ATCGACAGCA ACATCTCCGG TTTCATCAAC ATCCTGGAGG GATGCCGCCA CAACAAGGTG
AAGCACCTGG TCTACGCCTC GTCCTCCTCG GTCTACGGCG CCAACACCAC GATGCCCTTC
TCGGTGCACC ACAACGTGGA CCATCCGGTC TCGCTCTACG CCGCCACCAA GAAGGCGAAC
GAGCTGATGG CCCACACTTA TTCCAGCCTT TACGGGCTCC CCACCACGGG GCTGCGCTTT
TTCACCGTCT ATGGACCGTG GGGGCGTCCC GACATGGCGC TGTTCCTTTT CACCAAGGCG
ATCCTGGAGG GGAAGCCGAT CGACGTCTTC AACTATGGGA AGATGCAGCG CGACTTCACT
TTCGTCGACG ACATCGTGGA AGGCGTAAGC CGCGTGATCG ACAGCGTTCC TCCCGGCGAA
GCCGGCTGGA GCGGGGCGAC CCCGGATCCG GGGACGAGCT ACGCCCCTTA CAAGATCTAC
AACATCGGGA ACAACAACCC GGTGGAGCTC TTGCGCTTCA TCGAGGTGCT GGAAAAGGCG
CTGGGGAAAG AGGCGCAGAA GAACCTGCTT CCGATCCAGG CCGGCGACGT CCCGGCGACC
TACGCCGACG TGGACGATCT GATGCGGGAC GTCGGCTTCA AGCCGGCCAC CTCCATCGAG
GACGGAATAG CCCGCTTCGT CGCCTGGTAC CGGGATTTCT ACAAGGTCTA G
 
Protein sequence
MTKILVTGAA GFIGSHLSHR LLAKGHEVVG LDNLNDYYDV SLKEGRLARL EGKPGFRLVR 
MNLEDREGIA RLFAAEKFDS VVNLAAQAGV RYSIQNPYAY IDSNISGFIN ILEGCRHNKV
KHLVYASSSS VYGANTTMPF SVHHNVDHPV SLYAATKKAN ELMAHTYSSL YGLPTTGLRF
FTVYGPWGRP DMALFLFTKA ILEGKPIDVF NYGKMQRDFT FVDDIVEGVS RVIDSVPPGE
AGWSGATPDP GTSYAPYKIY NIGNNNPVEL LRFIEVLEKA LGKEAQKNLL PIQAGDVPAT
YADVDDLMRD VGFKPATSIE DGIARFVAWY RDFYKV