Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0860 |
Symbol | |
ID | 6783698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 1015859 |
End bp | 1016878 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642766834 |
Product | lipopolysaccharide heptosyltransferase II |
Protein accession | YP_002137679 |
Protein GI | 197117252 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATAT TGATTATCAA GCCGGGCGCC ATTGGCGACC TCCTGCTTAT CACGCCTGTG GTGCGGGCAC TGCGTGGGAT CTATCCGTCG GCAAGGGTTA CCCTCGTGGT CAGCTCCAGG GGGACCGCCT CGCTTTTCAG CCACAATCCG TTGGTGAACG ACGTCATCGT TTTCGACAGA AAGGGGGAGC ACAGCAGTTG GGGCAGTCTG TTTCAGCTCT GGCGGCGCAT CAGGGAAAAG AAGTTCGATC TGGTGCTGAA CTTCCAGCGC AGCAACCTAA AGGGGTGGCT CCTGGCCAGT GCGGCTCTTC CCAGCCGAAT CCTCGTCTAC CATAAGGCGA AAAGAAGGAT CGTGCACGCC GTGGTGAACC ATCTGGAGAC GTTGAAGCCC CTGGGGATAG AACCGGCGAA CTGCGAGATC TCGCTTCAAA TCGGAGTAGG AAAGGAAGAC GAAGCCTTTG CTGCCGATCT CCTCCGGCCG CTGTGGCTGG AGGGGAGGGA CGTGGTGGCA GTGAACCCGG GGGCGAGCCA CCCGGTGAAC CGGTGGGGCG TGGAGCATTT TGCCGGGCTG TGCGACCTTC TCTCTGAGCG GCTTGGGGCG AAGGTCATTA TTGTCGGCGG TGCAGACGAT ACTGTCCTCG CGGACCAGAT TGTGGCTAAG GCGACGTCCT CCCCTGTAGT ATTGACCGGA AAAACCTCTC TGCTGCAACT GGGAGCCATT TTGCAGAAAT CCGCATTGCT GGTCACCGGC GATACGGGGC CGATGCACAT CGCTACGGCG GTGGGTACTC GAGTGGTGGC GCTTTTCGGC GCGGCCGATC CCGAGAGGAC CGGCCCGGTG GGGGAGGGGC ACAGGGTCAT GCAGGCGCGC GAGGTGGCCT GCGTTCCCTG CCGCAGCCGC AAGTGCGCCA ATGAAAACTA CCTGGAGTGC ATGAACCGGA TCACGCCGGA GCAAGTGTTC GAGGCGGTCA AGGAGATGCT GCTGCAGCCG TGCCGCACCA GCGGAAGCGT TTGCAAGTGA
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Protein sequence | MNILIIKPGA IGDLLLITPV VRALRGIYPS ARVTLVVSSR GTASLFSHNP LVNDVIVFDR KGEHSSWGSL FQLWRRIREK KFDLVLNFQR SNLKGWLLAS AALPSRILVY HKAKRRIVHA VVNHLETLKP LGIEPANCEI SLQIGVGKED EAFAADLLRP LWLEGRDVVA VNPGASHPVN RWGVEHFAGL CDLLSERLGA KVIIVGGADD TVLADQIVAK ATSSPVVLTG KTSLLQLGAI LQKSALLVTG DTGPMHIATA VGTRVVALFG AADPERTGPV GEGHRVMQAR EVACVPCRSR KCANENYLEC MNRITPEQVF EAVKEMLLQP CRTSGSVCK
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