| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0859 |
|---|
| Symbol | |
|---|
| ID | 6783697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 1014695 |
|---|
| End bp | 1015723 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642766833 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_002137678 |
|---|
| Protein GI | 197117251 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAC TGATAACCGG CGGGTGCGGT TTTCTCGGAA GCAATTTGGC AGCACACGCG
CTCAAGCGCG GGGACGAACT CGTCGTCTTT GACAGCCTGT ACCGGCAAGG GTCCGTGGCC
AACCGGAAGT GGCTTGAAAC ACAGGGCCAT TTTCATTTCA TCCATGGTGA CATCCGCAAC
CAAAATGATG TCACTCGGTT GATCCAGGAG TTCCAGCCTG ACGCCATTTT CCATCTTGCT
GGACAGGTGG CGATGACAAC CTCCATTGCC AATCCCCGCA TGGATTTCGA GGTCAACGTA
GTGGGTACGC ACAACCTCCT GGAGGCCGTC CGCCTGTTCG CGCCGGAGGC AAGCGTATTT
TATTCTTCGA CGAACAAGGT GTACGGAGAC CTGGAGCAGT ACAGCTATGC TGAGACCGAG
ACGCGCTTTG TCTGCAGCGA CAGGCCGAAC GGGTTCGACG AGTCGACTCC GCTTGAGTTC
CACTCGCCGT ACGGCTGTTC CAAGGGGGGC GCCGACCAAT ACATGCTCGA CTACGCCCGC
ATCTTCGGCC TGAAGACCAC CGTATTTCGG CACTCCAGCA TGTACGGGGG GCGCCAGTTT
GCCACCTACG ACCAGGGGTG GATCGGTTGG TTCTGCCAAA AGGCGGCGGA GACCAGACTC
GGTTTGCTTA AGGAGCCTTT CACGATCTCC GGGACCGGTA AGCAGGTGCG CGATGTTCTG
CACGCCGACG ACATGATCAC CCTTTATTTC GGGGCGCTGG AGCGCGCCGA GCTGCTACGC
GGCCAGGTCT TCAACATCGG GGGGGGGATC GAGAACAGCC TGTCGCTTCT GGAGCTGTTC
GAGCTGCTGC AGGGGCACAT CGGGGGGGCG CTTGACTACC TGAAGCTCGC CCCCCGCGAG
AGCGACCAGC GGGTCTTCGT GGCCGATATC GGCAAGGCCG CCGCTTTGAT CGGCTGGCAG
CCACGGGTTT CCGCTTCCGA GGGCGTGGCC AGGATGCTGG AATGGACCAG CCGCGTGCTG
GGCCATTGA
|
|---|
| Protein sequence | MKLLITGGCG FLGSNLAAHA LKRGDELVVF DSLYRQGSVA NRKWLETQGH FHFIHGDIRN
QNDVTRLIQE FQPDAIFHLA GQVAMTTSIA NPRMDFEVNV VGTHNLLEAV RLFAPEASVF
YSSTNKVYGD LEQYSYAETE TRFVCSDRPN GFDESTPLEF HSPYGCSKGG ADQYMLDYAR
IFGLKTTVFR HSSMYGGRQF ATYDQGWIGW FCQKAAETRL GLLKEPFTIS GTGKQVRDVL
HADDMITLYF GALERAELLR GQVFNIGGGI ENSLSLLELF ELLQGHIGGA LDYLKLAPRE
SDQRVFVADI GKAAALIGWQ PRVSASEGVA RMLEWTSRVL GH
|
|---|
| |