Gene Gbem_0845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0845 
Symbol 
ID6783683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp999039 
End bp1000781 
Gene Length1743 bp 
Protein Length580 aa 
Translation table11 
GC content62% 
IMG OID642766819 
Productlipid A ABC exporter, fused ATPase and inner membrane subunits MsbA 
Protein accessionYP_002137664 
Protein GI197117237 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID[TIGR02203] lipid A export permease/ATP-binding protein MsbA 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.814931 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCAG TAAACGAGAA AGCAAAGGAC GCTTTCCAAA GACTTCTGGC ATACAGCCGC 
CCCTACTGGT GGCGCATCGC CGTGGCGGCG CTCGGATCAC TGGGCGTCGG CGCCATGGAC
GGAGCGCTCG CCTACCTGGT AGAACCGGTG TTGAGAAAAA TCTTCTCCGG GAAGGAGACC
GGCATCTTCG TCCTGCTCCC CATCGGGATA ATCGTGCTTT ACGCGCTGCG CGGCGTTTGC
CGTTACACCA ACGACTTCTT CATCAGGAGC GCCGGGCAGC TCGCCGTGCA GGACGTCAGG
AACGACCTGT ACCAGAAGAA CATGGGGCTC AGCCTCGGGT ACTTCTTCCA CAACGAGACC
GGGATCCTTA TGTCGCGCGT GATCAGCGAT GTCGCCATCA TGCAGGAAGG GGTGGCGAGC
GTCATCACCG GCCTGTTCCG CGACGGCATT TCCGCGGTCT CGCTTCTTTG CGTCATCTTC
TACCGCGACT GGAAGCTTGC GCTGATCTCT TTCGTGGTCA TCCCGCTCAC CGTGATCCCG
GCGCAGAAGA TCGGCAAGAG GATCAAGGGG CTGGCCAGGC ATGGGCAGGA GAAGATGGGG
GACCTGGCCA GCATCCTTCA GGAGACCTAT TCGGGGATCA AGGTGGTGAA GGCGTTCGGA
CTGGAGACGC GCGAGGTGGA GCGTTTCCGG CGCAGCAACG AGGAGTTCTA CTACTTCATC
AGGAAGAACA TAAAGTACGA GGGGCTGTCG GCCCCCATCA TGGAGTTCAT CATCTCCTTC
GGCGTGGCGG CCGTGATCTG GGTCGGCGGC AGCAGCGTCA TGCAGGGCAC CCGCAGCGCC
TCCGAATTCT TCTCCTTCAT CACCGCCATG GTATTGGTGT TCACCCCTGT TAAGCGGCTG
ATCGCCTCCT ACAACAACCT TCAGCGCTCG GTCGGCGCAG CTGAGCGTGT GTTCGAGGTG
ATGGACGAGG AGCCGGAGAT CGTGGATCTT CCCGGCTCCG GAGACCTGGG GAGGGCCAAG
GGGGAAGTGG AGTTCCGCGA CGTCCACTTC AAGTACGACG ACGAGTATGT ACTGCAGGGG
GTGAACCTCA TGGCCAGAAG GGGAGAGGTC ATCGCCCTGG TCGGTCCTTC CGGCGGCGGC
AAGACTACGC TCGTCTCGCT CATCACCAGG TTCTACGATC CGACCAGCGG GTCGGTCCTC
CTGGACGGGG TCGATATCCG GCAGCGGACC GTGAAGAGCC TCCTGGAGCA GATCGCCCTG
GTGGACCAGG AGACCATCCT CTTCAACGAC ACCATCGCCA ACAACATCCG CTACGGCAAG
ATCGACGCCA CCGATGCCGA GGTCGAGGCC GCGGCCCGCG CCGCCTTCGC GCATGAATTC
ATCCTGGAGC TTCCGGAAGG GTACGAAACC AACATCGGCG ATCGCGGGGT CCGTCTTTCC
GGAGGCCAGC GGCAGCGGCT CTGCATCGCC CGTGCGATCC TCAAGAACGC GCCGATACTG
ATCCTGGACG AGGCTACCAG CGCCCTCGAC ACCGAGAGCG AACAGATGGT GCAGCAGGCT
CTGAACAACC TGATGCACAA CCGCACCACC TTCGTCATCG CGCACCGCCT TTCCACCATC
ACCCACGCCG ACCGCATAGT CGTGCTGGAA AAGGGGACAG TCGCCGAGAT GGGGAGCCAC
CAGGCGCTCC TGGAAAACGA CGGCCTCTAC AGCCGTCTGC ACGGGATGCA GTTCAAGGCA
TAG
 
Protein sequence
MSAVNEKAKD AFQRLLAYSR PYWWRIAVAA LGSLGVGAMD GALAYLVEPV LRKIFSGKET 
GIFVLLPIGI IVLYALRGVC RYTNDFFIRS AGQLAVQDVR NDLYQKNMGL SLGYFFHNET
GILMSRVISD VAIMQEGVAS VITGLFRDGI SAVSLLCVIF YRDWKLALIS FVVIPLTVIP
AQKIGKRIKG LARHGQEKMG DLASILQETY SGIKVVKAFG LETREVERFR RSNEEFYYFI
RKNIKYEGLS APIMEFIISF GVAAVIWVGG SSVMQGTRSA SEFFSFITAM VLVFTPVKRL
IASYNNLQRS VGAAERVFEV MDEEPEIVDL PGSGDLGRAK GEVEFRDVHF KYDDEYVLQG
VNLMARRGEV IALVGPSGGG KTTLVSLITR FYDPTSGSVL LDGVDIRQRT VKSLLEQIAL
VDQETILFND TIANNIRYGK IDATDAEVEA AARAAFAHEF ILELPEGYET NIGDRGVRLS
GGQRQRLCIA RAILKNAPIL ILDEATSALD TESEQMVQQA LNNLMHNRTT FVIAHRLSTI
THADRIVVLE KGTVAEMGSH QALLENDGLY SRLHGMQFKA