Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0841 |
Symbol | lpxD |
ID | 6783679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 995333 |
End bp | 996370 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642766815 |
Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
Protein accession | YP_002137660 |
Protein GI | 197117233 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGAAAT CGCTTAATGA AATAGCGCAG TACCTGGGAG GGACCGTTTC CGGCGACGGC GAAGTCCTGA TCGGCGGGCT CGCGACCCTG GACGACGCGG GGGAGGGGAC GCTTACTTTT CTGGCCAACC CGAAGTACGC CGCCAAGGTC GCCACCACCA AGGCTTCGGC CGTGCTGATG GGGACCGGGG GGAACACCCA TGGCAAGAAC GCCATCTTCC ACCCCAACCC TTATCTTGCC TTCGCGAAGC TGCTCACCCT GTTTTACACC GCACCGGCAA AGCCGGTCGG CGTGTTGCCG GGCGCCTTCG TAGCCGATGG GGTGAAGCTC GGGGCGGACG TTTCGGTGTA CCCGGGCGCC TACATAGGCG CCGGCGCCGT GATCGGCGAC CGGGTGGTCC TGCACCCGGG AGTCGTGCTC TACCCGGGTG TCGTGGTCGG CAACGACGTG ACGCTGCACG CCAACGTGAG CGTCCGCGAG CGGTGCCGCA TCGGCAACCG CGTCACCATC CACGACGGGA CCGTGATCGG CTCCGACGGC TTCGGCTACG CGCCCGACGG CGCCTCCTAC TACAAGATCC CGCAGATCGG CATCGTCATC GTCGAGGATG ACGTCGAGAT CGGCTCCAAC TGCGTCATCG ACCGCGCGGC GCTTGAGGCC ACCCGGATCC GCCGCGGCAC GAAGATCGAC AACCTGGTGC AGATCGCGCA CAACGTCGTC ATCGGCGAGG ACTGCATCAT CGTCTCCCAG GTCGGCATCT CCGGCAGCAC CCAGCTGGGG AACCACGTAA CCCTCGGGGG GCAGGTCGGC GTCGCCGGCC ACATCAAGAT CGGCGACAAC GTCATGATCG GCGCGAAGTC CGGCGTGGCG GGGAACGTGG AGCCGAACCA GGTGCTTTCC GGCATCCCGG TGATGCCGCA CCGCGACTGG CTCAGGTCGG CCGGCATAGC GCCCAAGCTT CCCGAGATGA AGAAGACGCT CTCGGCGCTG GAGAAGCGGG TGGCGGAGTT GGAAGCGAAA CTGGCCAAAG GGGAGTAA
|
Protein sequence | MKKSLNEIAQ YLGGTVSGDG EVLIGGLATL DDAGEGTLTF LANPKYAAKV ATTKASAVLM GTGGNTHGKN AIFHPNPYLA FAKLLTLFYT APAKPVGVLP GAFVADGVKL GADVSVYPGA YIGAGAVIGD RVVLHPGVVL YPGVVVGNDV TLHANVSVRE RCRIGNRVTI HDGTVIGSDG FGYAPDGASY YKIPQIGIVI VEDDVEIGSN CVIDRAALEA TRIRRGTKID NLVQIAHNVV IGEDCIIVSQ VGISGSTQLG NHVTLGGQVG VAGHIKIGDN VMIGAKSGVA GNVEPNQVLS GIPVMPHRDW LRSAGIAPKL PEMKKTLSAL EKRVAELEAK LAKGE
|
| |