| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0838 |
|---|
| Symbol | |
|---|
| ID | 6783676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 991399 |
|---|
| End bp | 992073 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642766812 |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_002137657 |
|---|
| Protein GI | 197117230 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGCC TTCTCGAGGT GAAGAACCTC TACAAGTCCT ACGGCGAGGC CGCGGCCAAG
GTCGAGGTGC TGAAGGGAAT CGATCTCTGC GTGGAATCGG GCGACACCAT AGCCCTGGTG
GGCCCTTCCG GCGCCGGCAA GAGCACGCTC TTACACATCA TGGGGACCAT CGACCGCCCC
ACAAGCGGCG AGGTGCTCTT CGACGGGGAG CCGGTCTTCG CGCTCGCGGA CCAGCCGCTC
GCCTCCTTTC GGAACCGCTC CATCGGCTTC GTGTTCCAGT TCCACCATCT CCTCCCCGAG
TTCACGGCGC TGGAGAACGT GATGATGCCG CTTTTGATCG GCGGCGAGAA GAGGTCCAAG
GTCGAAGGGC GCGCCCGCGA GCTTTTGCAC GACGTGGGGC TGGCCCATCG GGTGACCCAC
CGGCCGGGTG AGCTGTCCGG GGGGGAGCAG CAGCGCGTCG CCATCGCGCG GGCGCTGGTG
CGGCAGCCCA GGCTCCTTCT GGCGGACGAG CCTACCGGGA ACCTCGATAT GAAGACCAGC
CACGAGGTGC ACGAACTGCT CTACTCGATA CAGCGCAGTA CCGGCATCAC GCTGGTGATC
GTCACCCACA ACGAGCAGCT GGCGGCGGGG ATGAACCGCA CCATCCGCGT GGTGGACGGC
AGGATCGTGG AATAG
|
|---|
| Protein sequence | MSSLLEVKNL YKSYGEAAAK VEVLKGIDLC VESGDTIALV GPSGAGKSTL LHIMGTIDRP
TSGEVLFDGE PVFALADQPL ASFRNRSIGF VFQFHHLLPE FTALENVMMP LLIGGEKRSK
VEGRARELLH DVGLAHRVTH RPGELSGGEQ QRVAIARALV RQPRLLLADE PTGNLDMKTS
HEVHELLYSI QRSTGITLVI VTHNEQLAAG MNRTIRVVDG RIVE
|
|---|
| |