Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0836 |
Symbol | |
ID | 6783674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 988677 |
End bp | 990155 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642766810 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_002137655 |
Protein GI | 197117228 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000359337 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGAGT TGAGCGAACT GCTGCTGCAG AGAAGACGCA AGGTAGATGC ATTGTGGGAG GCGGGTATCA ACCCGTACCC GAACGATTAC CGGCCGCAAC ACACCTCGGC CGACGTCCGC GCCGCTTACG GCGACAAGGA AGTCATCGAG GAAGAGCCGC AGAGCTTCGT GGTGGCCGGC CGCATATTGA TGCGCCGCTC CTTCGGCAAG GCCGCCTTCG TACAGGTGCA GGACCGCAAA GGGCGCATGC AGCTCTACAT GAAGAAGGAC ACCCTGGGCG AGGAGCTCTT CGCCGAGTTC GAAAACTACG ACATAGGCGA CATCATCGGC GCCACCGGCA CCCCTTTCCG CACCAAGACC GGGGAGCTTT CCCTCGCCGT CAGCGAACTG CGCCTGCTGA CCAAGTCGCT CTTGCCGCTT CCCGAGAAGT TCCACGGACT TACCGACGTA GAGACCCGTT ACCGCCAGCG CTACGTCGAC CTGATCGTCT CCCCCGACGT GCGCGAGGTG TTCTACAAGC GCTCCCGCGT CATCCAGCTC ATCCGCGACT TCATGACCAA GAACGACTTC CTGGAAGTGG AAACCCCGAT GATGCATCCC ATCCCCGGCG GCGCCACGGC GAAGCCGTTC GCGACGCACC ATAACGCGCT GGACATGGAG CTCTTCCTGC GCATCGCCCC CGAGCTCTAC CTGAAGAGGC TCGTGGTCGG CGGCTTCGAG CGCGTCTTCG AGATCAACCG CAACTTCAGA AACGAAGGGA TCTCGGTGCG CCACAACCCC GAGTTCACCA TGATGGAGTT CTACCAGGCC TACGCCACCT TCGAGGACCT GATGAACTAC ACCGAGGAAC TCCTCTGCCA CGTGGCCCAG GAACTTCTCG GCACCCTCGA CTTCAGCTAC GGCGGCGAGC CGATCAGCTT CCAGCGCCCC TGGCGCCGCT TCACCGTGAA GGAGGCGATC CTCGAGTACG GCGACATCGA CGCGAAGAGC CTTGAGGACC GCGACTTAGC CTACGCCTAC GCCCAGAAGA TCGGGCTGGA ACTCCCCGAG GACGTGGGGT ACGGCAAGCT CATCACCGAG ATCTTCGAGG AGGTCGCCGA GATCAAGCTG ATCCAGCCGA CCTTCATCAC CAACTACCCG ACCGAGGTTT CGCCCCTTTC CAGAAAGAGC GACCAGGACC CCGAGTACGT GGACCGCTTC GAGTTCTTCT GCGCCGGGCG CGAAATGGCC AACGCCTTCT CCGAGCTGAA CGACCCGCGC GACCAGAAGG AGCGCTTCCT GGCCCAGGTG GCCGCCAAGG ACAAGGGGGA CGAGGAGGCG CACTACATGG ACGAGGACTA CATCCGCGCC CTGGAGTACG GGCTTCCTCC CACCGCCGGC GAGGGGATCG GCATCGACCG CCTGGTCATG CTCTTGACCG ACTCCCCGTC CATCCGCGAC GTCATCCTGT TCCCGCAGTT AAGGAAAGAG GCGAAATAG
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Protein sequence | MEELSELLLQ RRRKVDALWE AGINPYPNDY RPQHTSADVR AAYGDKEVIE EEPQSFVVAG RILMRRSFGK AAFVQVQDRK GRMQLYMKKD TLGEELFAEF ENYDIGDIIG ATGTPFRTKT GELSLAVSEL RLLTKSLLPL PEKFHGLTDV ETRYRQRYVD LIVSPDVREV FYKRSRVIQL IRDFMTKNDF LEVETPMMHP IPGGATAKPF ATHHNALDME LFLRIAPELY LKRLVVGGFE RVFEINRNFR NEGISVRHNP EFTMMEFYQA YATFEDLMNY TEELLCHVAQ ELLGTLDFSY GGEPISFQRP WRRFTVKEAI LEYGDIDAKS LEDRDLAYAY AQKIGLELPE DVGYGKLITE IFEEVAEIKL IQPTFITNYP TEVSPLSRKS DQDPEYVDRF EFFCAGREMA NAFSELNDPR DQKERFLAQV AAKDKGDEEA HYMDEDYIRA LEYGLPPTAG EGIGIDRLVM LLTDSPSIRD VILFPQLRKE AK
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