Gene Gbem_0801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0801 
Symbol 
ID6783634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp942602 
End bp945463 
Gene Length2862 bp 
Protein Length953 aa 
Translation table11 
GC content61% 
IMG OID642766770 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_002137620 
Protein GI197117193 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.220837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCTCA AAACGCGCAG CACAGTTATC TTTTTGTCGT TAATCCTGCT TGGTGCATCC 
CTTGGTTTCC TCTTCTTTGA CCGGGGCCCA GCTCACCCCC GCCTTTTTTA TCTCTTTGCT
GTCCTTGTGG TTCTCGTTAC GGCAGCCACG ATCCACCTCG TCCTTTTCCG TTATCTGAAA
GCGATCGACG GCGCACGTGT CGCCTCGGAA AATGCTGCCA GTCGCCTCAA CCTTGCGCTG
AAAGCCGGAG GGTTCGGCAT CTGGGACTGG GACATCGTCC GTGACCTGCT GGTGTGGGAC
GACGGCATGT TGCAGATCTA CGGTATAGAC CAGAGCGCGT TCAATGGGTG CTTGGAGAGC
TGGAAGGAGG CGATCCACCC CGAGGACCGT GAACGGGCCC TGGCGGCCAC GCAGGCGGCG
CTGCGCGGGG AGACGGAATA TGATCTCTCG TTCAGGGTGC TGCGCCCAGA CGGGGAGATT
CGGTACATAA AGGCCGACGG CACCGTGATA CGCAATGGCG AAGGTGCTGC GGTGAGGTTC
ATGGGGCTGA ACGCCGATGT GACCGAGCAG AAGATTATCC TCGACAGCGT CATACGCGAG
AGGAACAAGG CCCAGCTATA CCTTGACATC GCAGGCGTCA TGTTCGCCGC GATCGACAGG
GAGGGGATCA TCAGGCTGAT CAACAAGAAG GGGGGGCAGA TCCTGGGCTA TCCGGAGGAC
GAACTGATCG GGCGTAACTG GTTCGAGGTC TGTCTTCCTC CGACGGCGGT CGGCGTCGTC
AAGGACGTCT TCGCCAAGCA GATGGCGGGG GAGATCGAGT CGGTCGAGTT TTTCGAAAAC
CCGATTCTCA CTCGAAGCGG CGAGGAGAGG ATGATCGCAT TCCACAACAC GCTTTTGCAT
GAGGAGGGCG GTGCGATATC CGGCGTCCTT TTTTCAGGCG AGGACATAAC TGAGCGTAAG
CGGGCGGAGG CGTCGCTTGA GAAGGCGGCC GGCGAATGGC AGGCGGCGAT GGACGCCTCG
GGCGACGCCA TCTACCTCCT CGATCTCGAC CGGAGGGTAC TGCGGGCGAA CAAGGCATTC
TACGAGATGA CCGGGAGGAG CCCGGAAAGC TCGATAGGGA TGCACATAGC GGAGATCATC
CACCCCGGCC ACTCGGCCCC GTGCGTCCTT TGCGACGCCC AGACTGCCCT CATCGACTTC
GTCACAGTCC TCGAGGCGGG TCACCCCGAC AACCACCAGG GATGCCCGGT GGAGGTGAGC
CTCAAGATGG TGCGCGACGG CAACGGCAAG CCGGTGAGCA TGCTCGTCAC GCGCCACGAC
CTCTCCTTCG ATCGCAAAAC CCAGGAGACC CTCAGGGAGA GCGAGGAGCG CTACCGCCAA
CTGGTCGAGC ATTCCCAGGA CATCATCTTC ATCACAAGCG GCGGGAAGAT CGTCTTTGTG
AACGACGCGG GGGTCCGTAT CCTGGGCGCT GCGAGCGCGA ACGATATCCT CTCCCGCAGG
CTGCTCGATT TCGTCCACCC CGATTCGAAG GCGCTGGTGC AGGAGCACAT GGAGATGGCG
GCCACCCAGA TGGGGCGCCT GCCGGTAACC GAGGTGAAGT ACCAGCGCCT CGACGGGAGC
ACCTTTTACG GCGAGGTCAC CGCCACCTCG ATCATGCACC AGGGAAACCC GGCGATCCAC
GTCTTTGTGC GCGACATCAC CAACAGGAAG AACCTCGAGG AGCAGCTGCG CCATTCGCAG
AAACTGGAGG CCGTTGGGCA TTTGGCCGGA GGAATCGCCC ACGATTTCAA CAACCTTCTT
ACCGTCATAG GAGGTTACGC CTCGCTGCTC GAGATGAAGA TGGAGCCGGG GGACCCCAAG
GCGGAGATGG TCGACCAGAT CGTCGCCTCC ACGGACCGCG CCGCCAACCT CACCCGCAGC
CTGCTTGCCT TCAGCCGGAA GCAGGAGATG CACGCAGACG ACTGCAGCCT CAACGAGATC
GTCCAGGGGG TCGGGAAGTT CCTGAGGAGG ATCATCGGTG AGGATATCAC GCTGAGCACC
ACCCTTGGCC CCGAACCGCT CACCGTCTTC GCCGACAAGG GGCAGATCGA GCAGGTGATC
ATCAATCTCG CGACCAACGC CCGGGACGCC ATGGAAAACG GGGGCGCCTT CTCCATCTCG
ACCGGGCTAA CCGTTTTTGA CGGCAGGTTT ATCCAGTCCC GCGGGTTCGG AAAGCCCGGG
AAGTTCGCCG TCGTCAAGGT CTCCGATACC GGCAAGGGGA TCGACAAGGG GGTGCGGGGC
AAGATCTTCG AGCCCTTCTT CACCACGAAG GAATTCGGGA AGGGGACCGG GCTCGGGCTT
TCCATCGTCT ACGGCATCGT GAAGCAGCAC AAGGGGTACA TCGACGTCGA CGGCCATCCG
GGGAAAGGGA CCACTTTCAG CATCTACCTC CCCCTCTCCG GAAACCCTCT TCCAAAGGGC
AGGGGGAAGG AGACGTTCGA CGCCATCAAA AGGGGGAGCG AGACCATCCT CATCGCCGAG
GACGAGGCGC ACGTCCGTGA ACTGGTGGAC TCGGTGCTGC AGCAGTTCGG CTACCGGACC
ATGCTCGCCG TCGACGGCAG GGATGCGGTG GAGAAGTTCA GGAGGCACCG GGAGAGCATC
GACCTCGTCT TCACCGACCT CATCATGCCG GGAAAAAGCG GCATGGAGCT CCACACCGAG
ATCAAGGCGA TGAGGCCCGA CGTCAAGGTG CTCTTCACCA GCGGCTACAT GGCTGACGTC
ATGGAAAAAC ACGGCAACGT CGACGAGCAT TACGACATCC TGATGAAGCC GATCGCTCCC
GCGGAGCTCG CCCGCAAGGT GCGCGAGATG CTCGACGCCT GA
 
Protein sequence
MTLKTRSTVI FLSLILLGAS LGFLFFDRGP AHPRLFYLFA VLVVLVTAAT IHLVLFRYLK 
AIDGARVASE NAASRLNLAL KAGGFGIWDW DIVRDLLVWD DGMLQIYGID QSAFNGCLES
WKEAIHPEDR ERALAATQAA LRGETEYDLS FRVLRPDGEI RYIKADGTVI RNGEGAAVRF
MGLNADVTEQ KIILDSVIRE RNKAQLYLDI AGVMFAAIDR EGIIRLINKK GGQILGYPED
ELIGRNWFEV CLPPTAVGVV KDVFAKQMAG EIESVEFFEN PILTRSGEER MIAFHNTLLH
EEGGAISGVL FSGEDITERK RAEASLEKAA GEWQAAMDAS GDAIYLLDLD RRVLRANKAF
YEMTGRSPES SIGMHIAEII HPGHSAPCVL CDAQTALIDF VTVLEAGHPD NHQGCPVEVS
LKMVRDGNGK PVSMLVTRHD LSFDRKTQET LRESEERYRQ LVEHSQDIIF ITSGGKIVFV
NDAGVRILGA ASANDILSRR LLDFVHPDSK ALVQEHMEMA ATQMGRLPVT EVKYQRLDGS
TFYGEVTATS IMHQGNPAIH VFVRDITNRK NLEEQLRHSQ KLEAVGHLAG GIAHDFNNLL
TVIGGYASLL EMKMEPGDPK AEMVDQIVAS TDRAANLTRS LLAFSRKQEM HADDCSLNEI
VQGVGKFLRR IIGEDITLST TLGPEPLTVF ADKGQIEQVI INLATNARDA MENGGAFSIS
TGLTVFDGRF IQSRGFGKPG KFAVVKVSDT GKGIDKGVRG KIFEPFFTTK EFGKGTGLGL
SIVYGIVKQH KGYIDVDGHP GKGTTFSIYL PLSGNPLPKG RGKETFDAIK RGSETILIAE
DEAHVRELVD SVLQQFGYRT MLAVDGRDAV EKFRRHRESI DLVFTDLIMP GKSGMELHTE
IKAMRPDVKV LFTSGYMADV MEKHGNVDEH YDILMKPIAP AELARKVREM LDA