| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0801 |
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| Symbol | |
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| ID | 6783634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 942602 |
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| End bp | 945463 |
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| Gene Length | 2862 bp |
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| Protein Length | 953 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642766770 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_002137620 |
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| Protein GI | 197117193 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.220837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCTCA AAACGCGCAG CACAGTTATC TTTTTGTCGT TAATCCTGCT TGGTGCATCC
CTTGGTTTCC TCTTCTTTGA CCGGGGCCCA GCTCACCCCC GCCTTTTTTA TCTCTTTGCT
GTCCTTGTGG TTCTCGTTAC GGCAGCCACG ATCCACCTCG TCCTTTTCCG TTATCTGAAA
GCGATCGACG GCGCACGTGT CGCCTCGGAA AATGCTGCCA GTCGCCTCAA CCTTGCGCTG
AAAGCCGGAG GGTTCGGCAT CTGGGACTGG GACATCGTCC GTGACCTGCT GGTGTGGGAC
GACGGCATGT TGCAGATCTA CGGTATAGAC CAGAGCGCGT TCAATGGGTG CTTGGAGAGC
TGGAAGGAGG CGATCCACCC CGAGGACCGT GAACGGGCCC TGGCGGCCAC GCAGGCGGCG
CTGCGCGGGG AGACGGAATA TGATCTCTCG TTCAGGGTGC TGCGCCCAGA CGGGGAGATT
CGGTACATAA AGGCCGACGG CACCGTGATA CGCAATGGCG AAGGTGCTGC GGTGAGGTTC
ATGGGGCTGA ACGCCGATGT GACCGAGCAG AAGATTATCC TCGACAGCGT CATACGCGAG
AGGAACAAGG CCCAGCTATA CCTTGACATC GCAGGCGTCA TGTTCGCCGC GATCGACAGG
GAGGGGATCA TCAGGCTGAT CAACAAGAAG GGGGGGCAGA TCCTGGGCTA TCCGGAGGAC
GAACTGATCG GGCGTAACTG GTTCGAGGTC TGTCTTCCTC CGACGGCGGT CGGCGTCGTC
AAGGACGTCT TCGCCAAGCA GATGGCGGGG GAGATCGAGT CGGTCGAGTT TTTCGAAAAC
CCGATTCTCA CTCGAAGCGG CGAGGAGAGG ATGATCGCAT TCCACAACAC GCTTTTGCAT
GAGGAGGGCG GTGCGATATC CGGCGTCCTT TTTTCAGGCG AGGACATAAC TGAGCGTAAG
CGGGCGGAGG CGTCGCTTGA GAAGGCGGCC GGCGAATGGC AGGCGGCGAT GGACGCCTCG
GGCGACGCCA TCTACCTCCT CGATCTCGAC CGGAGGGTAC TGCGGGCGAA CAAGGCATTC
TACGAGATGA CCGGGAGGAG CCCGGAAAGC TCGATAGGGA TGCACATAGC GGAGATCATC
CACCCCGGCC ACTCGGCCCC GTGCGTCCTT TGCGACGCCC AGACTGCCCT CATCGACTTC
GTCACAGTCC TCGAGGCGGG TCACCCCGAC AACCACCAGG GATGCCCGGT GGAGGTGAGC
CTCAAGATGG TGCGCGACGG CAACGGCAAG CCGGTGAGCA TGCTCGTCAC GCGCCACGAC
CTCTCCTTCG ATCGCAAAAC CCAGGAGACC CTCAGGGAGA GCGAGGAGCG CTACCGCCAA
CTGGTCGAGC ATTCCCAGGA CATCATCTTC ATCACAAGCG GCGGGAAGAT CGTCTTTGTG
AACGACGCGG GGGTCCGTAT CCTGGGCGCT GCGAGCGCGA ACGATATCCT CTCCCGCAGG
CTGCTCGATT TCGTCCACCC CGATTCGAAG GCGCTGGTGC AGGAGCACAT GGAGATGGCG
GCCACCCAGA TGGGGCGCCT GCCGGTAACC GAGGTGAAGT ACCAGCGCCT CGACGGGAGC
ACCTTTTACG GCGAGGTCAC CGCCACCTCG ATCATGCACC AGGGAAACCC GGCGATCCAC
GTCTTTGTGC GCGACATCAC CAACAGGAAG AACCTCGAGG AGCAGCTGCG CCATTCGCAG
AAACTGGAGG CCGTTGGGCA TTTGGCCGGA GGAATCGCCC ACGATTTCAA CAACCTTCTT
ACCGTCATAG GAGGTTACGC CTCGCTGCTC GAGATGAAGA TGGAGCCGGG GGACCCCAAG
GCGGAGATGG TCGACCAGAT CGTCGCCTCC ACGGACCGCG CCGCCAACCT CACCCGCAGC
CTGCTTGCCT TCAGCCGGAA GCAGGAGATG CACGCAGACG ACTGCAGCCT CAACGAGATC
GTCCAGGGGG TCGGGAAGTT CCTGAGGAGG ATCATCGGTG AGGATATCAC GCTGAGCACC
ACCCTTGGCC CCGAACCGCT CACCGTCTTC GCCGACAAGG GGCAGATCGA GCAGGTGATC
ATCAATCTCG CGACCAACGC CCGGGACGCC ATGGAAAACG GGGGCGCCTT CTCCATCTCG
ACCGGGCTAA CCGTTTTTGA CGGCAGGTTT ATCCAGTCCC GCGGGTTCGG AAAGCCCGGG
AAGTTCGCCG TCGTCAAGGT CTCCGATACC GGCAAGGGGA TCGACAAGGG GGTGCGGGGC
AAGATCTTCG AGCCCTTCTT CACCACGAAG GAATTCGGGA AGGGGACCGG GCTCGGGCTT
TCCATCGTCT ACGGCATCGT GAAGCAGCAC AAGGGGTACA TCGACGTCGA CGGCCATCCG
GGGAAAGGGA CCACTTTCAG CATCTACCTC CCCCTCTCCG GAAACCCTCT TCCAAAGGGC
AGGGGGAAGG AGACGTTCGA CGCCATCAAA AGGGGGAGCG AGACCATCCT CATCGCCGAG
GACGAGGCGC ACGTCCGTGA ACTGGTGGAC TCGGTGCTGC AGCAGTTCGG CTACCGGACC
ATGCTCGCCG TCGACGGCAG GGATGCGGTG GAGAAGTTCA GGAGGCACCG GGAGAGCATC
GACCTCGTCT TCACCGACCT CATCATGCCG GGAAAAAGCG GCATGGAGCT CCACACCGAG
ATCAAGGCGA TGAGGCCCGA CGTCAAGGTG CTCTTCACCA GCGGCTACAT GGCTGACGTC
ATGGAAAAAC ACGGCAACGT CGACGAGCAT TACGACATCC TGATGAAGCC GATCGCTCCC
GCGGAGCTCG CCCGCAAGGT GCGCGAGATG CTCGACGCCT GA
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| Protein sequence | MTLKTRSTVI FLSLILLGAS LGFLFFDRGP AHPRLFYLFA VLVVLVTAAT IHLVLFRYLK
AIDGARVASE NAASRLNLAL KAGGFGIWDW DIVRDLLVWD DGMLQIYGID QSAFNGCLES
WKEAIHPEDR ERALAATQAA LRGETEYDLS FRVLRPDGEI RYIKADGTVI RNGEGAAVRF
MGLNADVTEQ KIILDSVIRE RNKAQLYLDI AGVMFAAIDR EGIIRLINKK GGQILGYPED
ELIGRNWFEV CLPPTAVGVV KDVFAKQMAG EIESVEFFEN PILTRSGEER MIAFHNTLLH
EEGGAISGVL FSGEDITERK RAEASLEKAA GEWQAAMDAS GDAIYLLDLD RRVLRANKAF
YEMTGRSPES SIGMHIAEII HPGHSAPCVL CDAQTALIDF VTVLEAGHPD NHQGCPVEVS
LKMVRDGNGK PVSMLVTRHD LSFDRKTQET LRESEERYRQ LVEHSQDIIF ITSGGKIVFV
NDAGVRILGA ASANDILSRR LLDFVHPDSK ALVQEHMEMA ATQMGRLPVT EVKYQRLDGS
TFYGEVTATS IMHQGNPAIH VFVRDITNRK NLEEQLRHSQ KLEAVGHLAG GIAHDFNNLL
TVIGGYASLL EMKMEPGDPK AEMVDQIVAS TDRAANLTRS LLAFSRKQEM HADDCSLNEI
VQGVGKFLRR IIGEDITLST TLGPEPLTVF ADKGQIEQVI INLATNARDA MENGGAFSIS
TGLTVFDGRF IQSRGFGKPG KFAVVKVSDT GKGIDKGVRG KIFEPFFTTK EFGKGTGLGL
SIVYGIVKQH KGYIDVDGHP GKGTTFSIYL PLSGNPLPKG RGKETFDAIK RGSETILIAE
DEAHVRELVD SVLQQFGYRT MLAVDGRDAV EKFRRHRESI DLVFTDLIMP GKSGMELHTE
IKAMRPDVKV LFTSGYMADV MEKHGNVDEH YDILMKPIAP AELARKVREM LDA
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