| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0774 |
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| Symbol | |
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| ID | 6783608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 910260 |
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| End bp | 911684 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642766746 |
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| Product | ribonuclease H |
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| Protein accession | YP_002137596 |
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| Protein GI | 197117169 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0328] Ribonuclease HI |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.245945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATTT CGCCGCGGCT CTATCTGCTG GATGGATCCA GTTACATCTA TCGCGCCTAT
TACGGCTTCC GGGATATCGC CACCCCCGGC GGAATGCCTG CCAATGCCAT TTTCGGTTTC
ACGAAGATGC TCCTCGACCT GCTGCAGGAG CATCGTCCCG AATATTTCGC CGTCGTCTTC
GACCCTCCCC GTGAAAATAC CTTTCGCCGC GAAATGTACC CGGACTATAA GGCGCAGCGC
GACGCAATGC CCGAGGACCT GGTTTCCCAA CTCCCGTACC TACGGAAGAT ACTGCAGACT
CTCAACATCC CCATCCTGGA AGCCTCTCGC TTTGAGGCCG ACGACGTCAT TGCCACCCTC
GCCGCTAGGT TCGCCGCGGA AGGAGCGGAT GTCACCGTAG TCACCGGCGA CAAGGATTTA
CTGCAGATCG TCACCGACCG GATTGCCCTT TTGGACACGA TGAAGGGGAA GCGTTCGGGG
CCGCAGCAGG TTGTCGAGCG CTTCGGCGTC CCTCCTGAAT TGGTGGCCGA TGTCCTTGGG
CTTGCCGGCG ACAGCGGAGA CAATATCCCG GGAGTCCCGG GGATAGGCGA GAAGATAGCG
GCAAAGCTGG TACAGCAGTT CGGATCCCTT GAAAAAGTCC TGGAGTGGCG AAGCCTGGTG
AACGGGAAGA GCCGCAGGGA GAATCTGAAA ACCCATGCGG AACAGGCGAT TCTCTCCAAA
GCGCTTGCCA CCGTTCGCTA CGACGCTCCC GTTGATGTAT CCCTGGCAGA GTTGCAGAGC
CGGCCGGCGA GCGTCCAGGA ACTGGTTTCC CTGCTGCGCG AGTTGGGTTT TGCCGCCCTG
GAGGTTGCCT TCACCCCGCC GCCGCCCGGC ATTGTGGAGA TCTACAGCGA CGGTTCGGGA
AGGGACTCCG GGCCGGGGGG ATATGGCGTG ATCCTGCGCT ATGGGGAGCA CGAAAAGGAG
CTGAGTGGTT TCGAGCCCAG CTCAACCTCA CAGCGTATGG AGCTGATTGC AGCGATCAGG
GGACTGGAGG CGCTCAACGC TCCGAGCAGG GTGCGCGTTT TCAGCGATTC GCAGTACCTG
GTACGGGGGA TGAGCGAATG GCTAGCAGGC TGGATACGTG CCGGACGCCT TGAGACACCC
GACGCTCTGA AGAACCAGGA TCTCTGGCGT CAACTCGCCG ACCTGTCAGC CAGGCACAAG
GTAGAGTGGG AATGGGTGGC AGGACATGCG GGGCATCCGT TCAACGAGCG TTGCGACAAA
CTGGCTAAGC GAGCGGCAGA AGAGGGCGCT CGCGCCGTGA TCCCCGTCAC CCCCGAGATT
CCGACCATCC CGCCTTCGCC CCCACCCGTT CAGCCGATGC CGCTCCTTTG CACAGAGGAA
AGAACATTTG ATGAAGAGGC AGACGGCCAG TTCCGCCTGT GCTGA
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| Protein sequence | MEISPRLYLL DGSSYIYRAY YGFRDIATPG GMPANAIFGF TKMLLDLLQE HRPEYFAVVF
DPPRENTFRR EMYPDYKAQR DAMPEDLVSQ LPYLRKILQT LNIPILEASR FEADDVIATL
AARFAAEGAD VTVVTGDKDL LQIVTDRIAL LDTMKGKRSG PQQVVERFGV PPELVADVLG
LAGDSGDNIP GVPGIGEKIA AKLVQQFGSL EKVLEWRSLV NGKSRRENLK THAEQAILSK
ALATVRYDAP VDVSLAELQS RPASVQELVS LLRELGFAAL EVAFTPPPPG IVEIYSDGSG
RDSGPGGYGV ILRYGEHEKE LSGFEPSSTS QRMELIAAIR GLEALNAPSR VRVFSDSQYL
VRGMSEWLAG WIRAGRLETP DALKNQDLWR QLADLSARHK VEWEWVAGHA GHPFNERCDK
LAKRAAEEGA RAVIPVTPEI PTIPPSPPPV QPMPLLCTEE RTFDEEADGQ FRLC
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