| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0690 |
|---|
| Symbol | |
|---|
| ID | 6783523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 817819 |
|---|
| End bp | 819765 |
|---|
| Gene Length | 1947 bp |
|---|
| Protein Length | 648 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642766662 |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_002137513 |
|---|
| Protein GI | 197117086 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.185815 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCACC TGAAGAAGCT TTCCAAGGAC TTCGCGGGGA AACCGCTTTT CACTAATATC
AGCTGGCACC TGAAAAAGGG CGAGCGCGTG GGTCTCGTCG GCGAGAATGG CGCCGGCAAA
TCCACCTTGA TGCGCATCAT CGCGGGCGAG GTGGAAAGCA CCAGCGGCGA AATCCAGATC
GCGCGCGGCG GGACGGTAGG CTACCTCCCC CAGGACGGCA TCGTGGCGAA GGGACAGCCT
CTTTTCGCCG AGGTGATGAC GGCGCTCTCG GAGCTGCAGG AAATAGAGAG CGAGATCGCG
CAGCTCACGG CGCGGCTGGA GCGGGAATCC CACGACGCCC CGGGACACGA CCAGTTGCTG
GACCGCTTCG GGCATCTCCA GGAGGAGTTC CGCCTCAAGG GTGGCTATTC GATGGAGAGC
GAGGTGGGAA ACGTCCTCAC CGGCCTCGGC TTCTCCCCCG CCGACTGGGA AAAGGAGTGC
GGCGAGTTCT CCGGCGGCTG GCAGATGCGC ATTGCCCTGG CCAAACTGCT CCTGAAAAAA
CCGAACGTGC TCCTTCTTGA CGAGCCGACC AACCACCTGG ACATCGAGGC GCGCAACTGG
CTCGAAGGGT ACCTGCAGGG TTACCCGTAT TCGGTAATGT TGGTCTCGCA CGACCGCTTC
TTCCTGGACC AGGTCTGCTC GCGCATAGCC GAGGTATGGA ACCACGACAT CTCCGACTAC
CACTGCAACT ACAGCCGCTA TCTGGTGCTC AGGGAGGAGC GGGTATCCGC ACTCAGGGAC
GCTAAAAAAC GACAGGACGA GGAGGTGGAG AAGATCGAGG ACTTCATCTC CCGGTTCCGC
TACAAGACCG ACAAAGCGGC GCTGGTGCAG TCGCGCATCA AGCAGCTGGA GAAGATCGAG
CGCATCGTGC TGCCGCCGGA GAGGAAGAAG ATCCGTTTCA GCTTCCCCAC CCCTCCCAAA
AGCGGCAAGA CCGTGATGGA GTTGACCAAC GTCACCAAGG CGTACGGCAG CAACGTGGTC
CTGGACGGCA TCGACTTCAC GGTGGAAAGC GGCGAGCGGA TCGCCCTTGT AGGGCACAAC
GGCGCCGGCA AGTCGACCCT GATGCGGGTA ATGGCGAACG CCGACGTCAC CTCCGGGAGC
GTGAAAGACG GCCACAACGT GATCAAGGAT TACTTCGCCC AGGACCAGGC GCAGGAGTTG
GATGCCTCCA GGAGCGCCTA CGACGAACTC CTGGCGGACG CCCCCTTCGA CATGGTGCCG
CAGCTGCGCG ACATCCTTGG GGCCTTCCTC TTTTCCGGCG ACGATATCCA TAAGAAGGTC
GCGGTCCTCT CGGGGGGCGA AAGAAACCGT CTGGCATTAG CCAAGCTGCT CCTGCGCCCC
TCCAACCTGC TCCTCATGGA CGAGCCGACC AACCACCTCG ACCTCTTCAG CAAGGAGGTC
CTCCTCGAGG CGCTCAAGAA TTTCCCGGGC ACCGTGGTCT TCGTCTCCCA CGACCGCCAC
TTCATAGACG GCCTCGCCAC CAGGGTGGTC GAGGTCGGCG GGGGCAAGCT GGAAAGCTTC
TACGGCGACT ATGAATATTA TCTGGAGAAG ACCTCCGGGA TGGCGCCGTC ATCAGCTACC
GACGGCGGAG GACGCCTCAC CCCTTCGCCC GCGGAGCAGA AAAAGACCGA ATCTTCCGAC
AGCGACGCCG GGGGGGACCG GCTGTCACGG CAGCAGCAGC GCGAGCAGGA CAAACAGCGC
CAGAAAGAGG AGCGCGCCCG CGAGCGCAAG CAGACAGAGC TAGAGCAGAA GATCGCCGTG
AAGGAGGGGG AACTGGCCGA ACTGGAGCAA GCAATGGCGG CACCCGACTT CTTCTCGGAC
CATGAAGCCG CTCGTCTAGC GGGTGAACGG CACGCGCAAC TGACCGAAGA GATCGCGTCG
CTGTACCAAG CATGGGAGTC AGCGTAA
|
|---|
| Protein sequence | MLHLKKLSKD FAGKPLFTNI SWHLKKGERV GLVGENGAGK STLMRIIAGE VESTSGEIQI
ARGGTVGYLP QDGIVAKGQP LFAEVMTALS ELQEIESEIA QLTARLERES HDAPGHDQLL
DRFGHLQEEF RLKGGYSMES EVGNVLTGLG FSPADWEKEC GEFSGGWQMR IALAKLLLKK
PNVLLLDEPT NHLDIEARNW LEGYLQGYPY SVMLVSHDRF FLDQVCSRIA EVWNHDISDY
HCNYSRYLVL REERVSALRD AKKRQDEEVE KIEDFISRFR YKTDKAALVQ SRIKQLEKIE
RIVLPPERKK IRFSFPTPPK SGKTVMELTN VTKAYGSNVV LDGIDFTVES GERIALVGHN
GAGKSTLMRV MANADVTSGS VKDGHNVIKD YFAQDQAQEL DASRSAYDEL LADAPFDMVP
QLRDILGAFL FSGDDIHKKV AVLSGGERNR LALAKLLLRP SNLLLMDEPT NHLDLFSKEV
LLEALKNFPG TVVFVSHDRH FIDGLATRVV EVGGGKLESF YGDYEYYLEK TSGMAPSSAT
DGGGRLTPSP AEQKKTESSD SDAGGDRLSR QQQREQDKQR QKEERARERK QTELEQKIAV
KEGELAELEQ AMAAPDFFSD HEAARLAGER HAQLTEEIAS LYQAWESA
|
|---|
| |