| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0683 |
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| Symbol | |
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| ID | 6783516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 807677 |
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| End bp | 811033 |
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| Gene Length | 3357 bp |
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| Protein Length | 1118 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642766655 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_002137506 |
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| Protein GI | 197117079 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000715113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAGA GATTGATTAA CTCCGACTAT TTCCCCTTCC AGATACAGAT CTCGGCGGAT
TGCGGCTCGA AGATTGAGCT GCGCGATCTG CTCGAGGAGC TGGGAGAGGT GCCCGGCATC
ATATACGCCA GGCGGGTGGC GGCTAAGCTG AACCGCCAGT TGGCCCCGCA GGAAACCCCG
GTCCAGCCCG GCCTTTTGCA CCTATATTCC ATCCTGAGCC GGGTTTACCG CTACGTGCTC
AGCCAGTACT GCTCCAAACA GCAGCCGGGC ATACTGGCGG CCTTGTTGGC TCAGGCGGGC
TACCCGGAGT TCTCCGGCGA CGCCGGCCGC GCCCTTTACC GTTTCATGGA GCTTTTTCCT
TCCCGGCAGA TGGTGCTGGG GAACGAAACC CCGGAAGGGC TATTGGCGCA GGATGGCAAC
GACCTGGCGC GCCGGCAGGC CTTGACCGCG GAGCTGCTCC TCATGCTCTT AAACGGGGAG
AACCGTGCGC TGAACCAGTT TAGGCGCATC TTCGACGCTT CGGAACTGGC CTCCTCCTCC
CCCTACCTCG CCGTGACCCT GGAGCTCGAC CGCCGCCTGG CGAAGGCCCC CCCCTTCGAG
CCGGTGGGGG TGGCGCTCAC TGAGCTTCTG CGCGCCCCGC TGAAAGCCTC CCCCGATTCC
CTTTCCGGCC AGATCGCCTA CATCAGGGAC AACTGGACCT CTTTTCTCCC GCAGGAGCTT
CTGGGCGAGC TCGCTACCGC GCTCGACATA GTCTCCCAGG AAGGGCGCGC CTTCTTCGGC
GGACCGGGCG AGCCGAATGT GCTTAAGTTC GGCAGGAACG CCCAGCGCGG CGGTGACGAC
TATCCCGAGT ATGAGCGCTT CTCCCGGGAC GCCGACTGGA TGGCCAACGT GGTGATGATC
GCGAAGATGG TCTACGTCTG GCTGGGGCAG TTGGCGAAGA GCTACCAGAC CGAGGTGCAC
ACGCTGGACC AGATCCCGGA TGCCGAGCTG GACCGGCTGT CGCGCTACGG TTTCTCGGCC
CTGTGGCTGA TCGGCATCTG GGAGCGCTCC CCTGCCTCCC AGACCATCAA GCGCATTTCC
GGGAACCAGG AGGCGATCTC CTCTGCCTAT TCGCTCTACG ACTATGTAAT CGCGCACGAC
CTGGGTGGTG AGTGGGCCCT GGAGAACCTG AGAAGGCGCT GCGCCGCGCG CGGCATCAGG
CTTGCGAGCG ACATGGTCCC CAACCATACC GGCCTCTACT CCAAGTGGAC CGTGGAGCAC
CCCGACTGGT TCATCCAGCT CGATTACCCC CCCTATCCCG ACTACCAGTT CAACGGGCCC
GACCTCTCCC CCGACGGCCG GGTGGGGCTT TTCATCGAGG ACGGATACTG GGACAAGCGC
GACGCGGCGG TGGTGTTCAA GCACCTGGAC CGCGGCAACG GCAGGGTGCG CTACATCTAT
CACGGCAACG ACGGCACCAG CACCCCCTGG AACGACACGG CGCAGCTGAA CTACCTGATC
CCCGAGGTGC GCGAGGCGGT GATAGGGACC ATCCTCCATG TGGCGCGCCA GTTCCCGATC
ATCCGTTTCG ACGCCGCCAT GACCCTTGCC AAGAAGCACT ACCAGCGCCT GTGGTTCCCG
CTCCCCGGGC ACGGCTCCGG CGTCCCCTCA AGGGCCGAGC ACGGCATGGA CCGCCCGAGT
TTCGACGAGG TCTTCCCGGT CGAGTTCTGG CGCGACGTGG TGGACCGGGT CGCGGTCGAG
GCTCCCGACA CGCTCCTTCT GGCGGAGGCG TTCTGGCTCA TGGAGGGGTA CTTCGTGCGC
ACCCTCGGCA TGCACCGGGT CTACAACAGC GCCTTCATGA ACATGCTGAA GATGGAGGAG
AACGCCAAGT ACCGGCAGAC GGTGAAGAAC GTGCTGGAGT TCGAGCCGGA GATCCTGAAG
CGCTTCGTCA ACTTCATGAA CAACCCCGAC GAACGCACGG CCGTCGAGCA GTTCGGCAAG
GAAGGGAAGT ACTTCGGCGC GACCGTGCTC CTGGTGACCA TGCCGGGGCT CCCCATGGTC
GGGCACGGGC AGATCGAGGG GTTCCACGAG AAGTACGGCA TGGAGTACAA GCGGGCCTAT
TGGGACGAGC CGGTGGACGA GCACCTTGTG GCTAGGCACG AGAGCGACAT CTTTCCGCTC
ATGCGCAGGC GCCACATCTT CTCGGGAAGC GAGCAGTTCA CCCTGTACGA CTTCTTCAGC
GGCAACAGCG TGAACGAGAA CGTCTTTGCC TACTCCAACC GCAACGACGG CGAACGCGGG
CTGATCCTGT TCCACAACGC CTACGCCTCC ACCGCAGGGT GGATCAGGAG CTCTTGCGCC
GTGCTCAGGA AGAACGCTGC AGGGGGGACC TCGCTGGTCC AGACCAACCT GGGGGAAGCG
CTGGGCTTCA AGGGGGACGG CCGTCATTAC TACTCGTTTC GGGATTACGC CTCGGGGCTT
AGCTACTTGA GAAACGGCCG GGACCTGTGC GACCAGGGGC TTTACGTGGA GATGGGGGGG
TACGAGTACC ACGCTTTCCT TGACTTCGAG GAGATCTACG ACGACGACTT CGGGACCTGG
GGCGCCCTCT GCTACCGCAT GAACGGGGCG GGGGTGGAGA GCATCGAGGA GGAGGTGAAG
CAGGTTCGCT ACGCCTCGGC CCACGGCGCC CTGCAATCGC TGCTCGCCAA GGCGGCCGCT
GCAGCCCAGG AGCCGGGCGC CACCGCGCAG ACCATCCTGT CCCAGCTGGA GCCGCTTCTG
GCAGCCTTCT TCAAGGCCGT CGCGCCGCAG GCCCCCGAAA AAGTGCAGCG CCTTTTGGTG
AGCGCCTTCG GAACCGAAGC GAACGACGCG CTGCGGGGGG GCGCGGCCGA TCCGGCACGC
GCCCCCGGGG ACTGGCTCCT TCTTTGCGCC TATCTGGCCC TGCACCGGAT CGGCGATCTC
TCCGGCGAGG AATCGGCGGA GGTGGTTGAT GCGCTGGGCC TGGTGCGCCC GGTGGTGCAC
GCCTTTCACG CGCTTCCCCC AGCCGAGCCG GAGGAGACGG CCGACCTGTC GCCGGACGCT
TACGGGAAGC TTTTGCGGGT GCTTTTGCGC CATGACTCCT TCTTCTCGCG CTGCCACGAG
GTTGGGGCGG TGAAGAGCTG TGCGGCGCTT TTCTCCGACC CGCCGGCGGC CGGGTTTGTC
TACCTGCATG AAAGCGCCGG GGTGCAGTGG TTCAACAAGG AGCGCTTCGG GCTCCTGCTC
GATTGGTTCC TGAAACTGGA CGAGGACCGT GCGCTGCACG GGATGCTCAG TGAGAGTGCT
GCGGCCGCCG GCTACCGGCT CGATGAGCTA ATTAAAATCT TGGGGTCTCC TTCCTGA
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| Protein sequence | MKQRLINSDY FPFQIQISAD CGSKIELRDL LEELGEVPGI IYARRVAAKL NRQLAPQETP
VQPGLLHLYS ILSRVYRYVL SQYCSKQQPG ILAALLAQAG YPEFSGDAGR ALYRFMELFP
SRQMVLGNET PEGLLAQDGN DLARRQALTA ELLLMLLNGE NRALNQFRRI FDASELASSS
PYLAVTLELD RRLAKAPPFE PVGVALTELL RAPLKASPDS LSGQIAYIRD NWTSFLPQEL
LGELATALDI VSQEGRAFFG GPGEPNVLKF GRNAQRGGDD YPEYERFSRD ADWMANVVMI
AKMVYVWLGQ LAKSYQTEVH TLDQIPDAEL DRLSRYGFSA LWLIGIWERS PASQTIKRIS
GNQEAISSAY SLYDYVIAHD LGGEWALENL RRRCAARGIR LASDMVPNHT GLYSKWTVEH
PDWFIQLDYP PYPDYQFNGP DLSPDGRVGL FIEDGYWDKR DAAVVFKHLD RGNGRVRYIY
HGNDGTSTPW NDTAQLNYLI PEVREAVIGT ILHVARQFPI IRFDAAMTLA KKHYQRLWFP
LPGHGSGVPS RAEHGMDRPS FDEVFPVEFW RDVVDRVAVE APDTLLLAEA FWLMEGYFVR
TLGMHRVYNS AFMNMLKMEE NAKYRQTVKN VLEFEPEILK RFVNFMNNPD ERTAVEQFGK
EGKYFGATVL LVTMPGLPMV GHGQIEGFHE KYGMEYKRAY WDEPVDEHLV ARHESDIFPL
MRRRHIFSGS EQFTLYDFFS GNSVNENVFA YSNRNDGERG LILFHNAYAS TAGWIRSSCA
VLRKNAAGGT SLVQTNLGEA LGFKGDGRHY YSFRDYASGL SYLRNGRDLC DQGLYVEMGG
YEYHAFLDFE EIYDDDFGTW GALCYRMNGA GVESIEEEVK QVRYASAHGA LQSLLAKAAA
AAQEPGATAQ TILSQLEPLL AAFFKAVAPQ APEKVQRLLV SAFGTEANDA LRGGAADPAR
APGDWLLLCA YLALHRIGDL SGEESAEVVD ALGLVRPVVH AFHALPPAEP EETADLSPDA
YGKLLRVLLR HDSFFSRCHE VGAVKSCAAL FSDPPAAGFV YLHESAGVQW FNKERFGLLL
DWFLKLDEDR ALHGMLSESA AAAGYRLDEL IKILGSPS
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