| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0676 |
|---|
| Symbol | |
|---|
| ID | 6783509 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 800274 |
|---|
| End bp | 801353 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642766648 |
|---|
| Product | multihaem cytochrome |
|---|
| Protein accession | YP_002137499 |
|---|
| Protein GI | 197117072 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01905] doubled CXXCH domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGATACA GGGAAACCGC ATTTTTTCTT ACGCTGTCGA TTGCCGCCTG GGTCTGCCTG
AGCGTGTTGG CGCAACCCGG CGCATCGGCT TTTTCCTACG GTGAGGAGGC CGGCAAGAAC
GAGAGTTGCC TAGCCTGCCA CGGCGATTCG GCGCAGGTGC CCAAAGGCTT CTTCATCGAC
ACCAAGCACT TCAACCAGAC CACCCACGCC AGGATCGGGT GCGAGGCCTG TCACGCGGCG
GTCCCGGCCA CCCATCCGGA CGGCGCGAAG GTGGCAAGGG CTGGGTGCGG CGAGTGCCAT
GCCGACGTGG ACCGGGAATA CGCCACTGGG CTGCACGTCA AAAAGACCAC CTGCAACGGT
TGCCACAACC CGCACATGGT GCACAGCCCC AAGGAGATCT CCGGGCAGGA GATCAACGCC
ATGTGCTCCA ACTGCCACAA CACGCTGGAA ATGACGGCCA GGCACGGCGA GTGGCTCCCC
CAGTCGGAAC TGCACCTGCG GATGCTGCCG TGCATAACCT GCCATACCGG ATCGAAGGAG
TATTTCATCA GCATGTACAT AGTGAAGAGC AAGAACGGTT CGATGTTCGG CAAGCAGGAG
GTGGCGGGGT ACGACGAGTT GAAGCAGATG TCCGGGGGGA AGGAGATCGT CTCGCTGATC
GACAAAAACC GCGACAACTA CGTCTCGCTT GAGGAGCTGC GCGTCTTCAA CCGCAGCCAG
AATTCGCTGC GCCTGCACGG CATGATGACG CCGGTCTCCG TCTCGCACAA GTTCGAGATC
CTCGACGACC GCCGCAACTG CACCTTCTGC CACACCTCAG GCCCGGCCCT GATGCAGACA
AGCTTCATCG CGGTGCCGGA AGCCGACGGC AGCTACAGCC GCGTGCCGGT GGAAAAGGGA
GCGGTCCTGG ACGCACTTTA CGGCACGCCC GACTTCTACA TGATGGGGTC GACCAAGAAC
GGCGCCTTGA ACAAGATCGG CCTCGCCATC ATCTGCGGCG GACTGATCAT GCCGGTAGGC
CACGGCTTTG TGCGCTTCTT GACCCGTAAA AACAGGAACA CAAAGGAGCA TAAGTCATGA
|
|---|
| Protein sequence | MRYRETAFFL TLSIAAWVCL SVLAQPGASA FSYGEEAGKN ESCLACHGDS AQVPKGFFID
TKHFNQTTHA RIGCEACHAA VPATHPDGAK VARAGCGECH ADVDREYATG LHVKKTTCNG
CHNPHMVHSP KEISGQEINA MCSNCHNTLE MTARHGEWLP QSELHLRMLP CITCHTGSKE
YFISMYIVKS KNGSMFGKQE VAGYDELKQM SGGKEIVSLI DKNRDNYVSL EELRVFNRSQ
NSLRLHGMMT PVSVSHKFEI LDDRRNCTFC HTSGPALMQT SFIAVPEADG SYSRVPVEKG
AVLDALYGTP DFYMMGSTKN GALNKIGLAI ICGGLIMPVG HGFVRFLTRK NRNTKEHKS
|
|---|
| |