Gene Gbem_0672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0672 
Symbol 
ID6783505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp794958 
End bp797270 
Gene Length2313 bp 
Protein Length770 aa 
Translation table11 
GC content64% 
IMG OID642766644 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_002137495 
Protein GI197117068 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCATG CAGAGAGCAG GAGAAGATTG ACCCCATTCA ACATCACCAT GGCCTATGCC 
ACCTTCGGTG TCGCATGGGG CGCTGCGTCC TGTCTGTTCC CCGCGGTCCT AGCACATCAA
TCCTTCATGT ACGACGCAGT CGAAACAGTG AACCATGCCT TATTCGTATT CGGCACGGCC
TGCCTTTTGT ACCTGCTGAT CAAGCGCAGC GACGGCGAGG CGTCCCGCGG CCGCGAGTCC
CTCTCCAGGG TGAACCGGGC GCTCAAGACC TTCAGCGGCT GCAACCAGGC GCTGGTGCGC
GCCAGCGGCG AGCTCCAGCT GATGCAGGAG ATCTGCCGCA CCATCGTCGA GGTGGGGGGG
TACCGGCTCG CCTGGGTAGG GGTAGCCGAG CACGACGCCT GGAAGACGGT CCGCCCGGTG
GCCCAGTGGG GAGACCGCGA CGGTTACCTC ACCGACCTGG ATCTCAGTTG GGGGGACATA
GACCACGGCC GTGGGCCGAC CGGGACGGCG ATCAGGACCT GTACCACCCA GATCGTGCAG
AACATCAAAT ACGACCCCTC TTGGGCGCTC TGGCGGGAGG CCGGGGTGCA GCACGGCTTC
GCCTCCTCCA TCTCGCTGCC GCTCGTCGGG AGGGACCGCG CCATGGGGGC GCTGGTGATC
TTCGCCGCGG AAAAAAGGGC CTTCGGCAAG GAGGAGGTGA AGCTTCTCGA AGAACTGTCG
GCAGACCTTT CTTACGGCAT AGAAGCGCTC CGGATGGACG CCGAGCGCAA AAAGGCGGAG
AAGGAGATCC TCCTCCTCGC CTCGGTGCTA GAGCAGTCGA TGGAGGGGTT GCTCCTTTTG
GACAGCGACG GCACCGTGAA GTACGTGAAC CCCGCCATCG AGATCATCAC CGGCCTCGAT
GCGGCGGACA TCGTCGGGCA CGACCTCGCC ACGCTCGGCG CCGACGAGGA GAACGGCGGG
TTTTACCGTT ACCTCTTGGA CGCGCTGGAA AAAGGGGAAT GCCGGACCGG GCACTTCATC
CATACCGACG ACGACGGCGA CTTCTACGAG ATAGACGCGA CCCTTTGGTC CATCGCGGAC
AACATGGGCG CGGTCAGCAA TTACGCGGTG CTGATAAAGG ACGTGACCCA CGAGGTGAAG
CTGGAGCGGC AACTGCGCCA GGCCCAGCGG ATGGAGGCCA TCGCCACGCT CGCCGGGGGG
ATCGCCCACG ACTTCAACAA CAACCTGGCC TCGATCATCA CCTGCACCGA GATGGCGCGG
GACGACGTCC CTCCGGAGAG CCCGCTGCGC GAGTTGCTGG ACGTGGTGCT GAAATCGAGC
TACCGCGGCA GGAAACTGGT GAAGCAGATC CTCACCTTCT GCTGTCAGGG GGAGCAGGAG
AGGCAGCCGG TGCAGATCGA GCCGATCGTC ACCGAGTGCC TGAACCTGAT GCGCGCCTCG
CTCTCCTCCT CCATCAGCAT CAGGACCGAG ATGGGGGAGA ACCTCGGCCT GATCATGGCG
GACCCGACCC AGATCCACCA GATCATCATG AACCTGATCG CCAACGCCTC CCATGCCATG
CGGCACAAGG GTGGGATGCT GGACGTCGCC GTCGAGAACG TGGGGCTCGA CACCGCTGCG
GTCGCCGGGT TCCCCGACCT CCCCTCGGGG CGCTACCTGA AGCTGACCGT GAAGGATACC
GGGCACGGCA TGGACCAAAA GACCATGGAG CGCATCTTCG ATCCCTTCTT CACCACCAAG
AGCCATTCGG AGGGGACGGG GCTCGGCCTT TCCGTGGTGC ACGGCATCGT GAGAAACCAC
GGCGGTGCCA TCTCGGTGAG CAGCAAGCCC GGCGGCGGCG CCACCTTCGA GGTCTACCTC
CCCCGCATCG ACCAGTCCGG GACGGCACCG GGGGTGGTGG GGGAGCGGGC CGATCTGTCC
GGGAGCGGAA GCATCCTCTT CGTGGACGAC GAGGAGGACG TGGTCTTTGG CTGCAAAAAA
ATGCTGGAGC GGCTGGGGTA CCAGGTGACT ACCGGAGCCG ACGGCTTGCA GGCACTGGAA
CTGTTCCGGG GGAACCCGGA GGGGTTCGAC CTGGTGGTCA CCGACCAGAC CATGCCGCGC
ATGACCGGGA CCGAGCTCTC GCGGGAACTC TTGCAGATAC GCCCCGACAT CCCGGTCATC
CTCTGCACCG GGCTTGGTGC CGCGGCGGAG AAAGCGCAGT TGAAAGAGGA GGCCGAACAG
GTTGGGATAC GCGAGCTGGC GCTGAAGCCC TTGGACCGTG AGGAGTTCGC GTCGACGATA
CGGCGGGTGC TGGCGGGAAG GGAGCAGGAG TGA
 
Protein sequence
MSHAESRRRL TPFNITMAYA TFGVAWGAAS CLFPAVLAHQ SFMYDAVETV NHALFVFGTA 
CLLYLLIKRS DGEASRGRES LSRVNRALKT FSGCNQALVR ASGELQLMQE ICRTIVEVGG
YRLAWVGVAE HDAWKTVRPV AQWGDRDGYL TDLDLSWGDI DHGRGPTGTA IRTCTTQIVQ
NIKYDPSWAL WREAGVQHGF ASSISLPLVG RDRAMGALVI FAAEKRAFGK EEVKLLEELS
ADLSYGIEAL RMDAERKKAE KEILLLASVL EQSMEGLLLL DSDGTVKYVN PAIEIITGLD
AADIVGHDLA TLGADEENGG FYRYLLDALE KGECRTGHFI HTDDDGDFYE IDATLWSIAD
NMGAVSNYAV LIKDVTHEVK LERQLRQAQR MEAIATLAGG IAHDFNNNLA SIITCTEMAR
DDVPPESPLR ELLDVVLKSS YRGRKLVKQI LTFCCQGEQE RQPVQIEPIV TECLNLMRAS
LSSSISIRTE MGENLGLIMA DPTQIHQIIM NLIANASHAM RHKGGMLDVA VENVGLDTAA
VAGFPDLPSG RYLKLTVKDT GHGMDQKTME RIFDPFFTTK SHSEGTGLGL SVVHGIVRNH
GGAISVSSKP GGGATFEVYL PRIDQSGTAP GVVGERADLS GSGSILFVDD EEDVVFGCKK
MLERLGYQVT TGADGLQALE LFRGNPEGFD LVVTDQTMPR MTGTELSREL LQIRPDIPVI
LCTGLGAAAE KAQLKEEAEQ VGIRELALKP LDREEFASTI RRVLAGREQE