Gene Gbem_0652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0652 
Symbol 
ID6783485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand- 
Start bp774714 
End bp775370 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content67% 
IMG OID642766625 
Productthiamine-phosphate pyrophosphorylase 
Protein accessionYP_002137476 
Protein GI197117049 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.614638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGAGC TGGAATCCCC CTGGATAGAC TTCAACCTCT ACCTGATTAC CGGCAGGGAG 
GAGACGCAGG GGCGCCCCCT CGGGTACGTG GTCGAGGAAG CGCTTAAGGG CGGGGTGCGC 
GCGGTACAGT ACCGCGACAA GGACGCCACC AGCAAGGAAC TCTACGAGAC GGCCCACGAG 
CTGCGCCGCC TCACCTCGCG CTACGGCGCG AAACTCATCA TCAACGACCG CGCCGACATA 
GCGCTCGCCG TCGACGCCGA CGGCGTGCAC ATAGGAAGCG CCAGCATGCC CATCTACAAG 
GTGCGGCGGA TCCTGGGAGA GCGGAAGCTG ATCGGGGTCT CCTGCCACAA CAAGGCGCAG 
GCCATCGCAG CCCAGGAGAT GGGGGCCGAC TTCATCACCT TCGGCCCGGT CTACTACACC 
CCCTCCAAGG CCCCCTACGG CGACCCGGTG GGGACCGCAA AGCTTCAGAC AGTGGCGGGA 
CTTTTGCAGG TCCCGGTCTT CGCGCTCGGG GGGATCAAAA AGGAGAACTG CGCCGAGGCA 
GCCGGCTGCG GCGTGCGCGG CGTCGCGCTC ATCTCCGCCG TCCTCTCCGC AGCCGACCCG 
CGCGAGGCGG CGAAGAAGCT CATCGCCCTT CTCCCCCCCC TGGAGCACGC CGACTGA
 
Protein sequence
MKELESPWID FNLYLITGRE ETQGRPLGYV VEEALKGGVR AVQYRDKDAT SKELYETAHE 
LRRLTSRYGA KLIINDRADI ALAVDADGVH IGSASMPIYK VRRILGERKL IGVSCHNKAQ 
AIAAQEMGAD FITFGPVYYT PSKAPYGDPV GTAKLQTVAG LLQVPVFALG GIKKENCAEA 
AGCGVRGVAL ISAVLSAADP REAAKKLIAL LPPLEHAD